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(parent: 0c1f6ee) | patch
Merge in all of my testing code from trunk.
authorDiane Trout <diane@caltech.edu>
Fri, 29 Aug 2008 17:40:14 +0000 (17:40 +0000)
committerDiane Trout <diane@caltech.edu>
Fri, 29 Aug 2008 17:40:14 +0000 (17:40 +0000)
commit1a6839f0441d370403587a3b9ca32ae3c3c54d6a
tree757fd40b28037aee32ea98a9890165734a86a73etree | snapshot
parent0c1f6eecc99275f29ae1870b6f781e2cadc04d51commit | diff
Merge in all of my testing code from trunk.

Added a master runtest.sh script that deals with the annoying problem
caused by nesting each package in its own source tree.

I moved in my eland to bed file code (which might still need to be
renamed).

I resolved all the import errors in my illumina specific parsing
code (thanks to the test code)
13 files changed:
htswdataprod/htswdataprod/illumina/bustard.py diff | blob | history
htswdataprod/htswdataprod/illumina/firecrest.py diff | blob | history
htswdataprod/htswdataprod/illumina/gerald.py diff | blob | history
htswdataprod/htswdataprod/illumina/makebed.py [new file with mode: 0755] blob
htswdataprod/htswdataprod/illumina/runfolder.py [new file with mode: 0644] blob
htswdataprod/htswdataprod/illumina/test/__init__.py [new file with mode: 0644] blob
htswdataprod/htswdataprod/illumina/test/test_genome_mapper.py [new file with mode: 0644] blob
htswdataprod/htswdataprod/illumina/test/test_makebed.py [new file with mode: 0644] blob
htswdataprod/htswdataprod/illumina/test/test_runfolder026.py [new file with mode: 0644] blob
htswdataprod/htswdataprod/illumina/test/test_runfolder030.py [new file with mode: 0644] blob
htswdataprod/htswdataprod/runfolder.py [deleted file] blob | history
htswdataprod/scripts/eland_makebed [new file with mode: 0755] blob
runtests.sh [new file with mode: 0755] blob
htsworkflow sequencing LIMS software