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(parent: 3101ecf) | patch
Directly generate compressed fastq files from HiSeq split fastqs.
authorDiane Trout <diane@caltech.edu>
Mon, 12 May 2014 23:16:00 +0000 (16:16 -0700)
committerDiane Trout <diane@ghic.org>
Tue, 10 Jun 2014 23:30:17 +0000 (16:30 -0700)
commit4db6d9f86b96b7b289dc9e6a15b1379418c865ea
treec50ab4888c0f156a86f41dec141630474a4362e3tree | snapshot
parent3101ecf2c080bff9e424ad11f4e153546d6723b5commit | diff
Directly generate compressed fastq files from HiSeq split fastqs.

desplit_fastq is the only fastq builder that has the necessary
compression argument.
encode_submission/encode3.py diff | blob | history
htsworkflow/submission/condorfastq.py diff | blob | history
htsworkflow/submission/fastqname.py diff | blob | history
htsworkflow/templates/split_fastq.condor diff | blob | history
htsworkflow sequencing LIMS software