Added new profile program to make a bedgraph file. This is partically the result...
authorTim Reddy Tim <treddy@hudsonalpha.org>
Sun, 4 Jan 2009 01:27:11 +0000 (01:27 +0000)
committerTim Reddy Tim <treddy@hudsonalpha.org>
Sun, 4 Jan 2009 01:27:11 +0000 (01:27 +0000)
commit516c261bb3730e06198c7aaa3a2b384dad0b218b
treeaba755c64a355c6d28a07ae4baf460e2e1f80e23
parent93cbbdfdc05a251c1f01c4d9d4e09956ff99f421
Added new profile program to make a bedgraph file. This is partically the result of size limits imposed on the wig files by ucsc. As an added
feature, two bedgraph tracks are actually propduced, which give the forward and reverse strand reads in different colors.
htswanalysis/src/Makefile
htswanalysis/src/SRLib/loci.cpp
htswanalysis/src/SRLib/loci.h
htswanalysis/src/profile_reads_bedgraph.cpp