Some of the older flow cells used a default genome for eland instead
authorDiane Trout <diane@caltech.edu>
Thu, 29 May 2008 00:01:50 +0000 (00:01 +0000)
committerDiane Trout <diane@caltech.edu>
Thu, 29 May 2008 00:01:50 +0000 (00:01 +0000)
commit8172b45ee7af8edd6a1fe1e4892d5cc0c97fde54
treeddcee8710a93fdee6481c5b6b8a83b8f7750531d
parent4f67393572899735a20a2dd1f543ec9fe8fd54da
Some of the older flow cells used a default genome for eland instead
of specifying the genome path for each lane.

This patch will look up in the chipwidedefaults for the eland_genome if
it isn't found in the lane specific parameters
gaworkflow/pipeline/gerald.py
gaworkflow/pipeline/runfolder.py