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(parent: 264ecc1) | patch
Try to figure out where UCSC is hosting our submitted files
authorDiane Trout <diane@caltech.edu>
Tue, 20 Dec 2011 00:03:44 +0000 (16:03 -0800)
committerDiane Trout <diane@caltech.edu>
Tue, 20 Dec 2011 00:03:44 +0000 (16:03 -0800)
commit8b3c93dd6aff4b5b6bffd5164dc098eafbcd808b
treec6d304c23b1a700340fe2971951c6c02bfd9e0f9tree | snapshot
parent264ecc132ec008a35d8fcbd569432643d3839678commit | diff
Try to figure out where UCSC is hosting our submitted files
This patch reads the download files index from UCSC's test server for
our tracks and adds them to my ENCODE metadata RDF database.

In addition there's a bug fix where the status URN wasn't being
constructed correctly. It was just using the timestamp and not
submission URN + timestamp.
extra/ucsc_encode_submission/encode_find.py diff | blob | history
extra/ucsc_encode_submission/test_encode_find.py [new file with mode: 0644] blob
htsworkflow/submission/ucsc.py diff | blob | history
htsworkflow/util/rdfhelp.py diff | blob | history
htsworkflow sequencing LIMS software