Handle lanes that were only sequenced.
authorDiane Trout <diane@caltech.edu>
Tue, 5 May 2009 18:02:20 +0000 (18:02 +0000)
committerDiane Trout <diane@caltech.edu>
Tue, 5 May 2009 18:02:20 +0000 (18:02 +0000)
commitc553e004ef9974a82b7d4fcd5e995d898e92ed67
treea02039cab65a1c78c634cbb49660124ccb01f149
parent9556cc96fe8237633ccc7241b0e94aedb3b4d658
Handle lanes that were only sequenced.
So the report needs to be a bit smaller, and I need to archive a different file
Also this version only counts the number of records in the "sequence" file
which is raw sequence that passed the QC filter, I don't have a uniform way
of determining how many total sequences thre were.
htsworkflow/pipelines/eland.py
htsworkflow/pipelines/runfolder.py
htsworkflow/pipelines/test/simulate_runfolder.py
htsworkflow/pipelines/test/test_runfolder_ipar130.py