[project @ Handling of missing app errors with running pipeline]

[project @ Handling of missing app errors with running pipeline]
 WARNING: Still not fully functional, making progress through.
 * Prints out success or failure of run
   * FIXME: There is a weird BUG where towards the end of a run when
     the summary files are being generated that the pipeline code just
     stops processing. It's just sitting in memory not doing anything.
     The config_pipeline.py gets stuck on line = pipe.stdout.readline()
     at this point.
 * Checks for lack of ghostscript.