From: Diane Trout <diane@caltech.edu>
Date: Thu, 8 Mar 2012 19:00:45 +0000 (-0800)
Subject: Actually if I provide an output file, I want to write to the file
X-Git-Tag: v0.5.5~48
X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=htsworkflow.git;a=commitdiff_plain;h=2c4cc3596cbca553f52a77d55270aea9925814d9

Actually if I provide an output file, I want to write to the file
(forgot a not in the test for an output filename)
---

diff --git a/htsworkflow/pipelines/desplit_fastq.py b/htsworkflow/pipelines/desplit_fastq.py
index 85ad586..0624aaa 100644
--- a/htsworkflow/pipelines/desplit_fastq.py
+++ b/htsworkflow/pipelines/desplit_fastq.py
@@ -28,7 +28,7 @@ def main(cmdline=None):
         print (version())
         return 0
 
-    if opts.output is None:
+    if opts.output is not None:
         output = open(opts.output, 'w')
     else:
         output = sys.stdout