From: Diane Trout <diane@caltech.edu>
Date: Thu, 12 Jul 2012 17:54:37 +0000 (-0700)
Subject: fix a variable name typo
X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=htsworkflow.git;a=commitdiff_plain;h=3e779540d0e235bdc6251fd6037695448236da9a

fix a variable name typo
---

diff --git a/scripts/htsw-runfolder b/scripts/htsw-runfolder
index e0b9937..27df866 100755
--- a/scripts/htsw-runfolder
+++ b/scripts/htsw-runfolder
@@ -86,8 +86,8 @@ def load_run_xml_file(parser, args, opts):
     runs = []
     if opts.run_xml:
         # handle ~ shortcut
-        opt.run_xml = os.path.expanduser(opt.run_xml)
-        tree = ElementTree.parse(opt.run_xml).getroot()
+        opts.run_xml = os.path.expanduser(opts.run_xml)
+        tree = ElementTree.parse(opts.run_xml).getroot()
         runs.append(runfolder.PipelineRun(xml=tree))
     return runs