From: Diane Trout <diane@caltech.edu>
Date: Fri, 19 Jun 2009 22:49:16 +0000 (+0000)
Subject: I started using ResultLane, so stop treating it like an abstract class.
X-Git-Tag: 0.2.5~3
X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=htsworkflow.git;a=commitdiff_plain;h=5b3444ef3dde360bcbec17b9882a4aa50dd1019c

I started using ResultLane, so stop treating it like an abstract class.
I needed to initialize the ELAND class with something for the older
run xml files which don't have eland results initialized, So I initialized
some default values so the website wouldn't crash when accessing
these older files.
---

diff --git a/htsworkflow/pipelines/eland.py b/htsworkflow/pipelines/eland.py
index 2e0d9dc..5f3a345 100644
--- a/htsworkflow/pipelines/eland.py
+++ b/htsworkflow/pipelines/eland.py
@@ -52,7 +52,7 @@ class ResultLane(object):
         """
         Actually read the file and actually count the reads
         """
-        raise NotImplementedError("Can't count abstract classes")
+        pass
 
     def _update_name(self):
         # extract the sample name