From: Diane Trout <diane@caltech.edu>
Date: Thu, 21 Jan 2010 23:07:03 +0000 (+0000)
Subject: Update test code to deal with the switch to storing archive
X-Git-Tag: 0.4.0~20
X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=htsworkflow.git;a=commitdiff_plain;h=5e466144b1f908011b41de35baf1adaf8d0f230f

Update test code to deal with the switch to storing archive
qseq files instead of srf files
---

diff --git a/htsworkflow/pipelines/test/test_extract_results.py b/htsworkflow/pipelines/test/test_extract_results.py
index ee0c540..b64bd0f 100644
--- a/htsworkflow/pipelines/test/test_extract_results.py
+++ b/htsworkflow/pipelines/test/test_extract_results.py
@@ -76,8 +76,8 @@ class RunfolderExtractTests(unittest.TestCase):
         self.failUnlessEqual(len(runs), 1)
         runfolder.extract_results(runs, self.temp_dir, site='asite')
         archive = os.listdir(os.path.join(self.temp_dir, '4286GAAXX', 'C1-38'))
-        self.failUnlessEqual(len(archive), 19)
-        self.failUnless('asite_090608_HWI-EAS229_0117_4286GAAXX_6.srf' in archive)
+        self.failUnlessEqual(len(archive), 34)
+        self.failUnless('asite_090608_HWI-EAS229_0117_4286GAAXX_l6_r1.tar.bz2' in archive)
 
         
 def suite():