From: Diane Trout <diane@caltech.edu>
Date: Thu, 3 Dec 2015 22:48:39 +0000 (-0800)
Subject: report run_type
X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=htsworkflow.git;a=commitdiff_plain;h=83c31607e3b0de7040e4bf4de0e5b1692af6cfea

report run_type
---

diff --git a/htsworkflow/templates/aws_metadata.sparql b/htsworkflow/templates/aws_metadata.sparql
index 0468a23..9bada72 100644
--- a/htsworkflow/templates/aws_metadata.sparql
+++ b/htsworkflow/templates/aws_metadata.sparql
@@ -6,7 +6,7 @@ PREFIX ncbiTaxon: <http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=>
 PREFIX geoSoft: <http://www.ncbi.nlm.nih.gov/geo/info/soft2.html#>
 PREFIX cells: <http://encodewiki.ucsc.edu/EncodeDCC/index.php/Cell_lines#>
 
-select distinct ?dataset ?replicate ?award ?lab ?lane ?read_length ?barcode ?submitted_file_name ?file_format ?file_size ?output_type ?md5sum ?flowcell ?machine ?platform
+select distinct ?dataset ?replicate ?award ?lab ?lane ?read_length ?barcode ?submitted_file_name ?file_format ?file_size ?output_type ?md5sum ?flowcell ?machine ?platform ?run_type
 WHERE {
   <{{submission}}> a submissionOntology:submission ;
                    encode3:dataset ?dataset ;