From: Diane Trout <diane@ghic.org>
Date: Fri, 20 Mar 2015 21:20:27 +0000 (-0700)
Subject: Call print(msg) instead of print msg
X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=htsworkflow.git;a=commitdiff_plain;h=881b6ab3b913bf3bb13641e356632edb44c392f5

Call print(msg) instead of print msg
---

diff --git a/htsworkflow/pipelines/genome_mapper.py b/htsworkflow/pipelines/genome_mapper.py
index a080e57..4f57bbb 100644
--- a/htsworkflow/pipelines/genome_mapper.py
+++ b/htsworkflow/pipelines/genome_mapper.py
@@ -132,13 +132,13 @@ class constructMapperDict(object):
 if __name__ == '__main__':
 
   if len(sys.argv) != 2:
-    print 'useage: %s <base_genome_dir>' % (sys.argv[0])
+    print('useage: %s <base_genome_dir>' % (sys.argv[0]))
     sys.exit(1)
 
   d = getAvailableGenomes(sys.argv[1])
   d2 = constructMapperDict(d)
 
   for k,v in d2.items():
-    print '%s: %s' % (k,v)
+    print('%s: %s' % (k,v))
 
 
diff --git a/htsworkflow/pipelines/qseq2fastq.py b/htsworkflow/pipelines/qseq2fastq.py
index c33d014..15f1536 100644
--- a/htsworkflow/pipelines/qseq2fastq.py
+++ b/htsworkflow/pipelines/qseq2fastq.py
@@ -19,7 +19,7 @@ def main(cmdline=None):
     opts, args = parser.parse_args(cmdline)
 
     if opts.version:
-        print version()
+        print(version())
         return 0
 
     if opts.infile is not None: