From: Brandon King <kingb@caltech.edu>
Date: Thu, 22 Nov 2007 00:03:22 +0000 (+0000)
Subject: [project @ Shortend the s_generating regex; minor bug fix]
X-Git-Tag: 0.1.0~52
X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=htsworkflow.git;a=commitdiff_plain;h=9aaae65965ef52f3475c2322c3f04b2382e33131

[project @ Shortend the s_generating regex; minor bug fix]
  * Some reason the very end of the line was being
    auto-wrapped... a simple fix was to search for
    the begining half of the line. Simple and effective.
---

diff --git a/gaworkflow/pipeline/configure_run.py b/gaworkflow/pipeline/configure_run.py
index 19e2426..34fd3c5 100644
--- a/gaworkflow/pipeline/configure_run.py
+++ b/gaworkflow/pipeline/configure_run.py
@@ -117,7 +117,7 @@ RUN_FAILED = 'failed'
 #Info
 s_start = re.compile('Starting Genome Analyzer Pipeline')
 s_gerald = re.compile("[\S\s]+--GERALD[\S\s]+--make[\S\s]+")
-s_generating = re.compile('Generating journals, Makefiles and parameter files')
+s_generating = re.compile('^Generating journals, Makefiles')
 s_seq_folder = re.compile('^Sequence folder: ')
 s_seq_folder_sub = re.compile('want to make ')
 s_stderr_taskcomplete = re.compile('^Task complete, exiting')