From: Brandon King Date: Thu, 22 Nov 2007 00:05:14 +0000 (+0000) Subject: [project @ Run default changed to full run] X-Git-Tag: 0.1.0~51 X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=htsworkflow.git;a=commitdiff_plain;h=9ef94e2e4d779d4b5a4be9055a70b334df04ce4e [project @ Run default changed to full run] * Previously was only running with lane 4 tiles 100 through 104. --- diff --git a/gaworkflow/pipeline/configure_run.py b/gaworkflow/pipeline/configure_run.py index 34fd3c5..8bcf6a9 100644 --- a/gaworkflow/pipeline/configure_run.py +++ b/gaworkflow/pipeline/configure_run.py @@ -424,7 +424,7 @@ def configure(conf_info): #FIXME: this only does a run on 5 tiles on lane 4 pipe = subprocess.Popen(['goat_pipeline.py', '--GERALD=%s' % (conf_info.config_filepath), - '--tiles=s_4_0100,s_4_0101,s_4_0102,s_4_0103,s_4_0104', + #'--tiles=s_4_0100,s_4_0101,s_4_0102,s_4_0103,s_4_0104', '--make', '.'], stdout=subprocess.PIPE,