From: Diane Trout <diane@caltech.edu>
Date: Thu, 11 Oct 2012 23:32:27 +0000 (-0700)
Subject: Catch another lookup error.
X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=htsworkflow.git;a=commitdiff_plain;h=abfa5301e72411867a9dc819c6ba02a0cb9e8d08

Catch another lookup error.

Apparently one of gerald_summary[read][lane] was a dictionary
and so threw a KeyError instead of an IndexError. I might as well
catch both.
---

diff --git a/htsworkflow/frontend/samples/views.py b/htsworkflow/frontend/samples/views.py
index a53552c..7150d08 100644
--- a/htsworkflow/frontend/samples/views.py
+++ b/htsworkflow/frontend/samples/views.py
@@ -309,7 +309,7 @@ def _summary_stats(flowcell_id, lane_id, library_id):
             read = key.read-1 if key.read is not None else 0
             try:
                 eland_summary.clusters = gerald_summary[read][key.lane].cluster
-            except IndexError as e:
+            except (IndexError, KeyError) as e:
                 eland_summary.clustes = None
             eland_summary.cycle_width = cycle_width
             if hasattr(eland_summary, 'genome_map'):