From: Diane Trout <diane@caltech.edu>
Date: Mon, 22 Dec 2008 22:50:46 +0000 (+0000)
Subject: update make-tree-library script with new default location
X-Git-Tag: stanford.caltech-merged-database-2009-jan-15~10
X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=htsworkflow.git;a=commitdiff_plain;h=d3ccd01221c445af43a19c468cd7bbbb2ac43d80

update make-tree-library script with new default location
---

diff --git a/scripts/make-library-tree b/scripts/make-library-tree
index f61b3b5..57414c4 100644
--- a/scripts/make-library-tree
+++ b/scripts/make-library-tree
@@ -8,7 +8,7 @@ import os
 import stat
 import sys
 
-from gaworkflow.util import fctracker
+from htsworkflow.util import fctracker
 
 
 def find_lanes(flowcell_dir, flowcell_id, lane):
@@ -170,7 +170,7 @@ def main(argv=None):
     fcdb = fctracker.fctracker(opt.database)
     cells = fcdb._get_flowcells(opt.where)
 
-    root_dir = '/woldlab/mus/solexa-sequence'
+    root_dir = '/woldlab/loxcyc/data00/solexa-sequence'
     library_dir = os.path.join(root_dir, 'libraries')
     flowcell_dir = os.path.join(root_dir, 'flowcells')
     srfs_dir = os.path.join(root_dir, 'srfs')