From 273e9e961c4c26fae88b1e7f2e4567d304cb835c Mon Sep 17 00:00:00 2001 From: Diane Trout Date: Wed, 25 Jul 2012 11:53:11 -0700 Subject: [PATCH] Actually we want to capture the unanalyzed lanes if we can... --- htsworkflow/pipelines/runfolder.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/htsworkflow/pipelines/runfolder.py b/htsworkflow/pipelines/runfolder.py index 67dc505..18a38e0 100644 --- a/htsworkflow/pipelines/runfolder.py +++ b/htsworkflow/pipelines/runfolder.py @@ -632,7 +632,7 @@ def save_raw_data(num_jobs, r, site, raw_format, cycle_dir): lanes = [] for lane in r.gerald.lanes: lane_parameters = r.gerald.lanes.get(lane, None) - if lane_parameters is not None and lane_parameters.analysis != 'none': + if lane_parameters is not None: lanes.append(lane) run_name = srf.pathname_to_run_name(r.pathname) -- 2.30.2