From 3101ecf2c080bff9e424ad11f4e153546d6723b5 Mon Sep 17 00:00:00 2001 From: Diane Trout Date: Mon, 12 May 2014 16:14:18 -0700 Subject: [PATCH] the filename templates were moved from condorfastq to fastqname a while ago --- htsworkflow/submission/condorfastq.py | 2 -- 1 file changed, 2 deletions(-) diff --git a/htsworkflow/submission/condorfastq.py b/htsworkflow/submission/condorfastq.py index ffbd8e0..b6c2234 100644 --- a/htsworkflow/submission/condorfastq.py +++ b/htsworkflow/submission/condorfastq.py @@ -220,8 +220,6 @@ WHERE { Also update model with link between illumina result files and our target fastq file. """ - fastq_paired_template = '%(lib_id)s_%(flowcell)s_c%(cycle)s_l%(lane)s_r%(read)s.fastq' - fastq_single_template = '%(lib_id)s_%(flowcell)s_c%(cycle)s_l%(lane)s.fastq' # find what targets we're missing needed_targets = {} for seq in raw_files: -- 2.30.2