From 3a8b8280fd24d334007ddf6c728ffc1617fcf153 Mon Sep 17 00:00:00 2001 From: Diane Trout Date: Mon, 11 May 2009 20:03:16 +0000 Subject: [PATCH] Fix parameter list for base class. I was passing in the ElementTree xml into the base class constructor instead of an integer representing which 'end' the sample is from. Which when working with single ended ElandLanes ended up with the ElementTree node instead of none (which showed up in the UI). --- htsworkflow/pipelines/eland.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/htsworkflow/pipelines/eland.py b/htsworkflow/pipelines/eland.py index bd6864e..559a2a2 100644 --- a/htsworkflow/pipelines/eland.py +++ b/htsworkflow/pipelines/eland.py @@ -84,7 +84,7 @@ class ElandLane(ResultLane): LANE = "ElandLane" def __init__(self, pathname=None, lane_id=None, end=None, genome_map=None, eland_type=None, xml=None): - super(ElandLane, self).__init__(pathname, lane_id, xml) + super(ElandLane, self).__init__(pathname, lane_id, end) self._mapped_reads = None self._match_codes = None -- 2.30.2