From a66c328cada96d5afd9745c9f1fcce31f9c51799 Mon Sep 17 00:00:00 2001 From: Diane Trout Date: Mon, 30 Mar 2009 22:57:41 +0000 Subject: [PATCH] IPAR detection is more reliable than firecrest so do it first, and then check for firecrest second --- htsworkflow/pipelines/runfolder.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/htsworkflow/pipelines/runfolder.py b/htsworkflow/pipelines/runfolder.py index 6b953ce..5d663b3 100644 --- a/htsworkflow/pipelines/runfolder.py +++ b/htsworkflow/pipelines/runfolder.py @@ -239,9 +239,9 @@ def get_specific_run(gerald_dir): logging.debug('gerald_dir: %s' % (gerald_dir,)) # find our processed image dir - image_run = firecrest.firecrest(image_dir) + image_run = ipar.ipar(image_dir) if image_run is None: - image_run = ipar.ipar(image_dir) + image_run = firecrest.firecrest(image_dir) if image_run is None: msg = '%s does not contain an image processing step' % (image_dir,) logging.error(msg) -- 2.30.2