From b675709ca759de278a63f5b0b129cd85ddd04f94 Mon Sep 17 00:00:00 2001
From: Rami Rauch <rrauch@stanford.edu>
Date: Thu, 23 Apr 2009 22:44:49 +0000
Subject: [PATCH] minor update

---
 htswfrontend/htswfrontend/fctracker/models.py | 26 ++++++++++++++++---
 1 file changed, 22 insertions(+), 4 deletions(-)

diff --git a/htswfrontend/htswfrontend/fctracker/models.py b/htswfrontend/htswfrontend/fctracker/models.py
index 2b9aaeb..2a564d3 100644
--- a/htswfrontend/htswfrontend/fctracker/models.py
+++ b/htswfrontend/htswfrontend/fctracker/models.py
@@ -1,6 +1,7 @@
 from django.db import models
 from htswfrontend import settings
 from htswfrontend.htsw_reports.libinfopar import *
+from htswfrontend.files.models import ImageFile
 
 class Primer(models.Model):
   primer_name = models.CharField(max_length=100, db_index=True)
@@ -28,18 +29,35 @@ class Antibody(models.Model):
   source = models.CharField(max_length=500, blank=True, db_index=True)
   biology = models.TextField(blank=True)
   notes = models.TextField(blank=True)
+
+  # added: apr/14/09 
+  imagefiles = models.ManyToManyField(ImageFile,related_name='antibody_imagefiles',filter_interface=models.HORIZONTAL,blank=True, null=True)
+
   def __str__(self):
     return '%s - %s (%s)' % (self.antigene, self.antibodies, self.catalog)
+
+  def image_files(self):
+    images = self.imagefiles.all().order_by('file_title')                                                                                  
+    ar = []
+    for t in images:
+        ar.append('<a href="'+'/files/show/'+t.id.__str__()+'" title="View Image" target="_self">'+t.__str__()+'</a>')
+   
+    if len(ar) > 0:
+      return "<div style='max-width:600px'>"+"<br/>".join(ar) +"</div>"
+    else:
+      return ''
+  image_files.allow_tags = True  
+
   class Meta:
     verbose_name_plural = "antibodies"
     ordering = ["antigene"]
   class Admin:
-      list_display = ('antigene','nickname','antibodies','catalog','source','biology','notes')
+      list_display = ('antigene','nickname','antibodies','catalog','source','image_files','biology','notes')
       list_filter = ('antibodies','source')
       search_fields = ['antigene','nickname','catalog','antibodies','source','biology','notes']
       fields = (
         (None, {
-            'fields': (('antigene','nickname','antibodies'),('catalog','source'),('biology'),('notes'))
+            'fields': (('antigene','nickname','antibodies'),('catalog','source'),('biology'),('imagefiles'),('notes'))
         }),
        )
 
@@ -237,10 +255,10 @@ class Library(models.Model):
   DataRun.allow_tags = True
 
   def aligned_m_reads(self):
-    return getLibReads(self.library_id)
+    return getLibReads(self.library_id,'ByLib')
 
   def aligned_reads(self):
-    res = getLibReads(self.library_id)
+    res = getLibReads(self.library_id,'ByLib')
 
     # Check data sanlty                                                                                                                                    
     if res[2] != 'OK':
-- 
2.30.2