From dd8f54ea1fe43b764a98b427a3e84e76a2ec6b37 Mon Sep 17 00:00:00 2001 From: Diane Trout Date: Mon, 7 Feb 2011 15:51:05 -0800 Subject: [PATCH] Add documentation about which Phred format we're generating --- htsworkflow/pipelines/qseq2fastq.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/htsworkflow/pipelines/qseq2fastq.py b/htsworkflow/pipelines/qseq2fastq.py index 286663b..ac44c1e 100755 --- a/htsworkflow/pipelines/qseq2fastq.py +++ b/htsworkflow/pipelines/qseq2fastq.py @@ -43,7 +43,7 @@ def main(cmdline=None): def make_parser(): - usage = "%prog: [options] *_qseq.txt" + usage = "%prog: [options] *_qseq.txt\nProduces Phred33 files by default" parser = OptionParser(usage) parser.add_option("-a", "--fasta", default=False, action="store_true", help="produce fasta files instead of fastq files") -- 2.30.2