Machine | HWI-EAS229 |
Run Folder | 080627_HWI-EAS229_0036_3055HAXX |
Chip ID | unknown |
Clusters | Clusters (PF) | Yield (kbases) |
80933224 | 43577803 | 1133022 |
Lane | Sample ID | Sample Target | Sample Type | Length | Filter | Num Tiles | Tiles |
1 | unknown | mm9 | ELAND | 26 | '((CHASTITY>=0.6))' | 100 | Lane 1 |
2 | unknown | mm9 | ELAND | 26 | '((CHASTITY>=0.6))' | 100 | Lane 2 |
3 | unknown | mm9 | ELAND | 26 | '((CHASTITY>=0.6))' | 100 | Lane 3 |
4 | unknown | elegans170 | ELAND | 26 | '((CHASTITY>=0.6))' | 100 | Lane 4 |
5 | unknown | elegans170 | ELAND | 26 | '((CHASTITY>=0.6))' | 100 | Lane 5 |
6 | unknown | elegans170 | ELAND | 26 | '((CHASTITY>=0.6))' | 100 | Lane 6 |
7 | unknown | elegans170 | ELAND | 26 | '((CHASTITY>=0.6))' | 100 | Lane 7 |
8 | unknown | elegans170 | ELAND | 26 | '((CHASTITY>=0.6))' | 100 | Lane 8 |
Lane Info | Tile Mean +/- SD for Lane | |||||||||||
Lane | Lane Yield (kbases) | Clusters (raw) | Clusters (PF) | 1st Cycle Int (PF) | % intensity after 20 cycles (PF) | % PF Clusters | % Align (PF) | Alignment Score (PF) | % Error Rate (PF) | |||
1 | 158046 | 96483 +/- 9074 | 60787 +/- 4240 | 329 +/- 35 | 101.88 +/- 6.03 | 63.21 +/- 3.29 | 70.33 +/- 0.24 | 9054.08 +/- 59.16 | 0.46 +/- 0.18 | |||
2 | 156564 | 133738 +/- 7938 | 60217 +/- 1926 | 444 +/- 39 | 92.62 +/- 7.58 | 45.20 +/- 3.31 | 51.98 +/- 0.74 | 6692.04 +/- 92.49 | 0.46 +/- 0.09 | |||
3 | 185818 | 152142 +/- 10002 | 71468 +/- 2827 | 366 +/- 36 | 91.53 +/- 8.66 | 47.19 +/- 3.80 | 82.24 +/- 0.44 | 10598.68 +/- 64.13 | 0.41 +/- 0.04 | |||
4 | 34953 | 15784 +/- 2162 | 13443 +/- 1728 | 328 +/- 40 | 97.53 +/- 9.87 | 85.29 +/- 1.91 | 80.02 +/- 0.53 | 10368.82 +/- 71.08 | 0.15 +/- 0.05 | |||
5 | 167936 | 119735 +/- 8465 | 64590 +/- 2529 | 417 +/- 37 | 88.69 +/- 14.79 | 54.10 +/- 2.59 | 76.95 +/- 0.32 | 9936.47 +/- 65.75 | 0.28 +/- 0.02 | |||
6 | 173463 | 152177 +/- 8146 | 66716 +/- 2493 | 372 +/- 39 | 87.06 +/- 9.86 | 43.98 +/- 3.12 | 78.80 +/- 0.43 | 10162.28 +/- 49.65 | 0.38 +/- 0.03 | |||
7 | 149287 | 84649 +/- 7325 | 57418 +/- 3617 | 295 +/- 28 | 89.40 +/- 8.23 | 67.97 +/- 1.82 | 33.38 +/- 0.25 | 4247.92 +/- 32.37 | 1.00 +/- 0.03 | |||
8 | 106953 | 54622 +/- 4812 | 41136 +/- 3309 | 284 +/- 37 | 90.21 +/- 9.10 | 75.39 +/- 2.27 | 48.33 +/- 0.29 | 6169.21 +/- 169.50 | 0.86 +/- 1.22 | |||
Tile mean across chip | ||||||||||||
Av. | 101166 | 54472 | 354 | 92.36 | 60.29 | 65.25 | 8403.69 | 0.50 |
Lane Info | Phasing Info | Raw Data (tile mean) | Filtered Data (tile mean) | Lane | Clusters (tile mean) (raw) | % Phasing | % Prephasing | % Error Rate (raw) | Equiv Perfect Clusters (raw) | % retained | Cycle 2-4 Av Int (PF) | Cycle 2-10 Av % Loss (PF) | Cycle 10-20 Av % Loss (PF) | % Align (PF) | % Error Rate (PF) | Equiv Perfect Clusters (PF) |
1 | 96483 | 0.7700 | 0.3100 | 1.00 | 49676 | 63.21 | 317 +/- 32 | 0.13 +/- 0.44 | -1.14 +/- 0.34 | 70.33 | 0.46 | 41758 |
2 | 133738 | 0.7700 | 0.3100 | 1.22 | 40467 | 45.20 | 415 +/- 33 | 0.29 +/- 0.40 | -0.79 +/- 0.35 | 51.98 | 0.46 | 30615 |
3 | 152142 | 0.7700 | 0.3100 | 1.30 | 78588 | 47.19 | 344 +/- 26 | 0.68 +/- 0.51 | -0.77 +/- 0.42 | 82.24 | 0.41 | 57552 |
4 | 15784 | 0.7700 | 0.3100 | 0.29 | 11095 | 85.29 | 306 +/- 34 | 0.20 +/- 0.69 | -1.28 +/- 0.66 | 80.02 | 0.15 | 10671 |
5 | 119735 | 0.7700 | 0.3100 | 0.85 | 60335 | 54.10 | 380 +/- 32 | 0.34 +/- 0.49 | -1.55 +/- 4.69 | 76.95 | 0.28 | 49015 |
6 | 152177 | 0.7700 | 0.3100 | 1.21 | 70905 | 43.98 | 333 +/- 27 | 0.57 +/- 0.50 | -0.91 +/- 0.39 | 78.80 | 0.38 | 51663 |
7 | 84649 | 0.7700 | 0.3100 | 1.38 | 21069 | 67.97 | 272 +/- 20 | 1.15 +/- 0.52 | -0.84 +/- 0.58 | 33.38 | 1.00 | 18265 |
8 | 54622 | 0.7700 | 0.3100 | 1.17 | 21335 | 75.39 | 262 +/- 31 | 1.10 +/- 0.59 | -1.01 +/- 0.47 | 48.33 | 0.86 | 19104 |
Lane | Tile | Clusters (raw) | Av 1st Cycle Int (PF) | Av % intensity after 20 cycles (PF) | % PF Clusters | % Align (PF) | Av Alignment Score (PF) | % Error Rate (PF) |
1 | 0001 | 114972 | 326.48 | 94.39 | 57.44 | 70.2 | 9038.6 | 0.44 |
Lane | Tile | Clusters (raw) | Av 1st Cycle Int (PF) | Av % intensity after 20 cycles (PF) | % PF Clusters | % Align (PF) | Av Alignment Score (PF) | % Error Rate (PF) |
2 | 0001 | 147793 | 448.12 | 83.68 | 38.57 | 53.7 | 6905.4 | 0.54 |
Lane | Tile | Clusters (raw) | Av 1st Cycle Int (PF) | Av % intensity after 20 cycles (PF) | % PF Clusters | % Align (PF) | Av Alignment Score (PF) | % Error Rate (PF) |
3 | 0001 | 167904 | 374.05 | 86.91 | 40.36 | 81.3 | 10465.0 | 0.47 |
Lane | Tile | Clusters (raw) | Av 1st Cycle Int (PF) | Av % intensity after 20 cycles (PF) | % PF Clusters | % Align (PF) | Av Alignment Score (PF) | % Error Rate (PF) |
4 | 0001 | 20308 | 276.85 | 92.87 | 84.26 | 80.4 | 10413.8 | 0.16 |
Lane | Tile | Clusters (raw) | Av 1st Cycle Int (PF) | Av % intensity after 20 cycles (PF) | % PF Clusters | % Align (PF) | Av Alignment Score (PF) | % Error Rate (PF) |
Lane | Tile | Clusters (raw) | Av 1st Cycle Int (PF) | Av % intensity after 20 cycles (PF) | % PF Clusters | % Align (PF) | Av Alignment Score (PF) | % Error Rate (PF) |
6 | 0001 | 166844 | 348.12 | 77.59 | 38.13 | 79.7 | 10264.4 | 0.44 |
Lane | Tile | Clusters (raw) | Av 1st Cycle Int (PF) | Av % intensity after 20 cycles (PF) | % PF Clusters | % Align (PF) | Av Alignment Score (PF) | % Error Rate (PF) |
7 | 0001 | 98913 | 269.90 | 86.66 | 64.55 | 33.2 | 4217.5 | 1.02 |
Lane | Tile | Clusters (raw) | Av 1st Cycle Int (PF) | Av % intensity after 20 cycles (PF) | % PF Clusters | % Align (PF) | Av Alignment Score (PF) | % Error Rate (PF) |
8 | 0001 | 64972 | 243.60 | 89.40 | 73.17 | 48.3 | 6182.8 | 0.71 |