setup.py

   1 from setuptools import setup, Extension
   2 import distutils.command.build_ext
   3 from distutils.dep_util import newer
   4
   5 import os
   6 import sys
   7
   8 def replace_suffix(path, new_suffix):
   9   return os.path.splitext(path)[0]+new_suffix
  10
  11 class build_ext(distutils.command.build_ext.build_ext):
  12   description="also compile qt moc files"
  13
  14   def __init__(self, *args, **kwargs):
  15     if sys.platform == 'linux2':
  16       self.moc_binary = 'moc'
  17       self.rcc_binary = 'rcc'
  18
  19       if os.path.exists('/usr/bin/moc-qt4'):
  20         self.moc_binary = '/usr/bin/moc-qt4'
  21       if os.path.exists('/usr/bin/rcc-qt4'):
  22         self.rcc_binary = '/usr/bin/rcc-qt4'
  23
  24     distutils.command.build_ext.build_ext.__init__(self, *args, **kwargs)
  25
  26   def swig_sources(self, sources, extensions=None):
  27     if self.extensions is None:
  28       return
  29
  30     # filter out sources
  31     qrc_sources = []
  32     moc_sources = []
  33     other_sources = []
  34     for src in sources:
  35       base,ext= os.path.splitext(src)
  36       if ext == '.qrc':
  37         qrc_sources.append(src)
  38       elif ext in ('.hpp', '.hxx', '.h'):
  39         moc_sources.append(src)
  40       else:
  41         other_sources.append(src)
  42
  43     build_sources = other_sources
  44     # create qresource
  45     build_sources.extend(self.compile_qrcs(qrc_sources))
  46     # create moc files
  47     build_sources.extend(self.compile_mocs(moc_sources))
  48     return build_sources
  49
  50   def compile_qrcs(self, qrc_files):
  51     targets = []
  52     for qrc in qrc_files:
  53       if os.path.exists(qrc):
  54         source = qrc
  55         name = os.path.splitext(os.path.split(qrc)[1])[0]
  56         target = "qrc_"+name+".cpp"
  57         if newer(source, target) or self.force:
  58           self.compile_qrc(name, source, target)
  59         targets.append(target)
  60     return targets
  61
  62   def compile_qrc(self, name, source, target):
  63     """compile qt resource file"""
  64     os.system("%s -name %s -o %s %s" %(self.rcc_binary, name, target, source))
  65
  66   def compile_mocs(self, moc_headers):
  67     targets = []
  68
  69     for moc_hpp in moc_headers:
  70       if os.path.exists(moc_hpp):
  71         source = moc_hpp
  72         target = "moc_"+replace_suffix(os.path.split(moc_hpp)[1],'.cpp')
  73         if newer(source, target) or self.force:
  74           self.compile_moc(source, target)
  75         targets.append(target)
  76     return targets
  77
  78   def compile_moc(self, source, target):
  79     os.system("%s -o%s %s" %(self.moc_binary, target, source))
  80
  81 boost_py = ["py/conserved_path.cpp",
  82            "py/glsequence.cpp",
  83            "py/module.cpp",
  84            "py/mussa.cpp",
  85            "py/MussaWindow.cpp",
  86            "py/nway_paths.cpp",
  87            "py/sequence.cpp",]
  88
  89 core_alg = ["alg/annotation_colors.cpp",
  90             "alg/color.cpp",
  91             "alg/conserved_path.cpp",
  92             "alg/flp.cpp",
  93             "alg/flp_seqcomp.cpp",
  94             "alg/glseqbrowser.cpp",
  95             "alg/glsequence.cpp",
  96             "alg/mussa.cpp",
  97             "alg/nway_entropy.cpp",
  98             "alg/nway_other.cpp",
  99             "alg/nway_paths.cpp",
 100             #"alg/nway_refine",
 101             #"alg/parse_options.cpp",
 102             "alg/sequence.cpp",]
 103
 104 moc_headers = ['qui/ImageSaveDialog.hpp',
 105                'qui/ImageScaler.hpp',
 106                'qui/IntAction.hpp',
 107                'qui/MussaAlignedWindow.hpp',
 108                'qui/MussaWindow.hpp',
 109                'qui/ThresholdWidget.hpp',
 110                'qui/ZoomWidget.hpp',
 111                'qui/motif_editor/MotifDetail.hpp',
 112                'qui/motif_editor/MotifEditor.hpp',
 113                'qui/mussa_setup_dialog/IsFileValidator.hpp',
 114                'qui/mussa_setup_dialog/MussaSetupDialog.hpp',
 115                'qui/mussa_setup_dialog/MussaSetupWidget.hpp',
 116                'qui/mussa_setup_dialog/SequenceSetupFrame.hpp',
 117                'qui/mussa_setup_dialog/SequenceSetupWidget.hpp',
 118                'qui/mussa_setup_dialog/SetupInfo.hpp',
 119                'qui/seqbrowser/ScrollableSequenceBrowser.hpp',
 120                'qui/seqbrowser/SequenceBrowser.hpp',
 121                'qui/seqbrowser/SequenceBrowserSidebar.hpp',
 122                'qui/seqbrowser/SequenceBrowserWidget.hpp',
 123                'qui/seqbrowser/SequenceDescription.hpp',]
 124
 125 qui_sources = ['qui/ImageSaveDialog.cpp',
 126                'qui/ImageScaler.cpp',
 127                'qui/IntAction.cpp',
 128                'qui/MussaAlignedWindow.cpp',
 129                'qui/MussaWindow.cpp',
 130                'qui/ThresholdWidget.cpp',
 131                'qui/ZoomWidget.cpp',
 132                'qui/motif_editor/MotifDetail.cpp',
 133                'qui/motif_editor/MotifEditor.cpp',
 134                'qui/mussa_setup_dialog/IsFileValidator.cpp',
 135                'qui/mussa_setup_dialog/MussaSetupDialog.cpp',
 136                'qui/mussa_setup_dialog/MussaSetupWidget.cpp',
 137                'qui/mussa_setup_dialog/SequenceSetupFrame.cpp',
 138                'qui/mussa_setup_dialog/SequenceSetupWidget.cpp',
 139                'qui/mussa_setup_dialog/SetupInfo.cpp',
 140                'qui/seqbrowser/ScrollableSequenceBrowser.cpp',
 141                'qui/seqbrowser/SequenceBrowser.cpp',
 142                'qui/seqbrowser/SequenceBrowserSidebar.cpp',
 143                'qui/seqbrowser/SequenceBrowserWidget.cpp',
 144                'qui/seqbrowser/SequenceDescription.cpp',
 145               ]
 146
 147 qrc_sources = ['icons.qrc']
 148
 149 sources = boost_py+core_alg+moc_headers+qui_sources+qrc_sources
 150
 151
 152 extra_link_args = []
 153 libraries = ['boost_python',
 154              'boost_filesystem']
 155 include_dirs = ['.']
 156
 157 if sys.platform == 'darwin':
 158   import py2app
 159   qtroot = '/usr/local/qt/4.1.2'
 160   qtincludes.os.path.join(qtroot, 'include')
 161   extra_link_args.extend([
 162     '-F%s/lib' % (qtroot),
 163     '-framework', 'QtCore',
 164     '-framework', 'QtGui',
 165     '-framework', 'QtOpenGL',
 166     '-framework', 'OpenGL',
 167                       ])
 168 else:
 169   qtroot = '/usr'
 170   qtinclude = os.path.join(qtroot, 'include', 'qt4')
 171   libraries += ['QtCore']
 172   libraries += ['QtGui']
 173   libraries += ['QtOpenGL']
 174
 175
 176
 177 for qtdir in ['','QtCore','QtGui','QtOpenGL']:
 178   include_dirs.append(os.path.join(qtinclude, qtdir))
 179
 180 mussa_ext = Extension("_mussa",
 181                       sources,
 182                       include_dirs=include_dirs,
 183                       library_dirs=[
 184                         #'/Developer/SDKs/MacOSX10.4u.sdk/usr/X11R6/lib/',
 185                         '/usr/local/qt/4.1.2/lib',
 186                       ],
 187                       libraries=libraries,
 188                       extra_link_args = extra_link_args
 189             )
 190 setup(app=['mussa.py'],
 191       name='mussa',
 192       version='0.0',
 193       ext_modules=[mussa_ext],
 194       cmdclass={'build_ext': build_ext})
 195
 196