X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=mussa.git;a=blobdiff_plain;f=alg%2Fsequence.hpp;h=706f499f29a48596a0471245448a61568ff0535f;hp=f7d3c364c868a003ff7db3ceb3238e0ea2b1a90a;hb=d058d097a3015f3ba861d494b68c8cb6f003f6d6;hpb=0c1c957ddc2e51b005065f7aaf56460274a782c8

diff --git a/alg/sequence.hpp b/alg/sequence.hpp
index f7d3c36..706f499 100644
--- a/alg/sequence.hpp
+++ b/alg/sequence.hpp
@@ -17,16 +17,6 @@
 #include <boost/filesystem/path.hpp>
 #include <boost/filesystem/fstream.hpp>
 
-#include <boost/serialization/base_object.hpp>
-#include <boost/serialization/export.hpp>
-#include <boost/serialization/list.hpp>
-#include <boost/serialization/nvp.hpp>
-#include <boost/serialization/string.hpp>
-#include <boost/serialization/shared_ptr.hpp>
-#include <boost/serialization/utility.hpp>
-#include <boost/serialization/version.hpp>
-#include <boost/serialization/vector.hpp>
-
 #include <boost/shared_ptr.hpp>
 #include <boost/enable_shared_from_this.hpp>
 
@@ -69,7 +59,6 @@ private:
     ar & BOOST_SERIALIZATION_NVP(sequence);
   }
 };
-BOOST_CLASS_EXPORT(motif);
 
 class Sequence;
 typedef boost::shared_ptr<Sequence> SequenceRef;
@@ -256,18 +245,6 @@ protected:
   //! look for a string sequence type and and it to an annotation list
   void add_string_annotation(std::string a_seq, std::string name);
   
-  // boost::serialization support
-  friend class boost::serialization::access;
-  template<class Archive>
-  void serialize(Archive& ar, const unsigned int /*version*/) {
-    ar & BOOST_SERIALIZATION_NVP(seq);
-    ar & BOOST_SERIALIZATION_NVP(header);
-    ar & BOOST_SERIALIZATION_NVP(species);
-    ar & BOOST_SERIALIZATION_NVP(annotation_list);
-    ar & BOOST_SERIALIZATION_NVP(motif_list);
-  }
 };
 
-//BOOST_CLASS_EXPORT(Sequence);
-//BOOST_CLASS_EXPORT_GUID(Sequence, "Sequence")
 #endif