X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=mussa.git;a=blobdiff_plain;f=examples%2Fmck3test_example.museq;fp=examples%2Fmck3test_example.museq;h=6184d20dba710b51495bb6f95244dda0eb234a0e;hp=0000000000000000000000000000000000000000;hb=6524cd9b9ceabf1ec539bdf8b387227b12cf1fa2;hpb=f23df24bee726272f2b9853fa71fcbfa736b5716

diff --git a/examples/mck3test_example.museq b/examples/mck3test_example.museq
new file mode 100644
index 0000000..6184d20
--- /dev/null
+++ b/examples/mck3test_example.museq
@@ -0,0 +1,20 @@
+<Mussa_Sequence>
+<Sequence>
+CCATCCTGGTCTATAGAGAGAGTTCCAGAACAGCCAGGGCTACAGATAAACCCATCTGGAAAAACAAAGTTGAATGACCCAAGAGGGGTTCTCAGAGGGTGGCGTGTGCTCCCTGGCAAGCCTATGACATGGCCGGGGCCTGCCTCTCTCTGCCTCTGACCCTCAGTGGCTCCCATGAACTCCTTGCCCAATGGCATCTTTTTCCTGCGCTCCTTGGGTTATTCCAGTCTCCCCTCAGCATTCCTTCCTCAGGGCCTCGCTCTTCTCTCTGCTCCCTCCTTGCACAGCTGGCTCTGTCCACCTCAGATGTCACAGTGCTCTCTCAGAGGAGGAAGGCACCATGTACCCTCTGTTTCCCAGGTAAGGGTTCAATTTTTAAAAATGGTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTCAAGACAGGGCTCCTCTGTGTAGTCCTAACTGTCTTGAAACTCCCTCTGTAGACCAGGTCGACCTCGAACTCTTGAAACCTGCCACGGACCACCCAGTCAGGTATGGAGGTCCCTGGAATGAGCGTCCTCGAAGCTAGGTGGGTAAGGGTTCGGCGGTGACAAACAGAAACAAACACAGAGGCAGTTTGAATCTGAGTGTATTTTGCAGCTCTCAAGCAGGGGATTTTATACATAAAAAAAAAAAAAAAAAAAAAACCAAACATTACATCTCTTAGAAACTATATCCAATGAAACAATCACAGATACCAACCAAAACCATTGGGCAGAGTAAAGCACAAAAATCATCCAAGCATTACAACTCTGAAACCATGTATTCAGTGAATCACAAACAGAACAGGTAACATCATTATTAATATAAATCACCAAAATATAACAATTCTAAAAGGATGTATCCAGTGGGGGCTGTCGTCCAAGGCTAGTGGCAGATTTCCAGGAGCAGGTTAGTAAATCTTAACCACTGAACTAACTCTCCAGCCCCATGGTCAATTATTATTTAGCATCTAGTGCCTAATTTTTTTTTATAAATCTTCACTATGTAATTTAAAACTATTTTAATTCTTCCTAATTAAGGCTTTCTTTACCATATACCAAAATTCACCTCCAATGACACACGCGTAGCCATATGAAATTTTATTGTTGGGAAAATTTGTACCTATCATAATAGTTTTGTAAATGATTTAAAAAGCAAAGTGTTAGCCGGGCGTGGTGGCACACGCCTTTAATCCCTGCACTCGGGAGGCAGGGGCAGGAGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGAACCCCCCACCCCCCAAAAAAAGCAAAGTGTTGGTTTCCTTGGGGATAAAGTCATGTTAGTGGCCCATCTCTAGGCCCATCTCACCCATTATTCTCGCTTAAGATCTTGGCCTAGGCTACCAGGAACATGTAAATAAGAAAAGGAATAAGAGAAAACAAAACAGAGAGATTGCCATGAGAACTACGGCTCAATATTTTTTCTCTCCGGCGAAGAGTTCCACAACCATCTCCAGGAGGCCTCCACGTTTTGAGGTCAATGGCCTCAGTCTGTGGAACTTGTCACACAGATCTTACTGGAGGTGGTGTGGCAGAAACCCATTCCTTTTAGTGTCTTGGGCTAAAAGTAAAAGGCCCAGAGGAGGCCTTTGCTCATCTGACCATGCTGACAAGGAACACGGGTGCCAGGACAGAGGCTGGACCCCAGGAACACCTTAAACACTTCTTCCCTTCTCCGCCCCCTAGAGCAGGCTCCCCTCACCAGCCTGGGCAGAAATGGGGGAAGATGGAGTGAAGCCATACTGGCTACTCCAGAATCAACAGAGGGAGCCGGGGGCAATACTGGAGAAGCTGGTCTCCCCCCAGGGGCAATCCTGGCACCTCCCAGGCAGAAGAGGAAACTTCCACAGTGCATCTCACTTCCATGAATCCCCTCCTCGGACTCTGAGGTCCTTGGTCACAGCTGAGGTGCAAAAGGCTCCTGTCATATTGTGTCCTGCTCTGGTCTGCCTTCCACAGCTTGGGGGCCACCTAGCCCACCTCTCCCTAGGGATGAGAGCAGCCACTACGGGTCTAGGCTGCCCATGTAAGGAGGCAAGGCCTGGGGACACCCGAGATGCCTGGTTATAATTAACCCAGACATGTGGCTGCCCCCCCCCCCCCAACACCTGCTGCCTGAGCCTCACCCCCACCCCGGTGCCTGGGTCTTAGGCTCTGTACACCATGGAGGAGAAGCTCGCTCTAAAAATAACCCTGTCCCTGGTGGATCCAGGGTGAGGGGCAGGCTGAGGGCGGCCACTTCCCTCAGCCGCAGGTTTGTTTTCCCAAGAATGGTTTTTCTGCTTCTGTAGCTTTTCCTGTCAATTCTGCCATGGTGGAGCAGCCTGCACTGGGCTTCTGGGAGAAACCAAACCGGGTTCTAACCTTTCAGCTACAGTTATTGCCTTTCCTGTAGATGGGCGACTACAGCCCCACCCCCACCCCCGTCTCCTGTATCCTTCCTGGGCCTGGGGATCCTAGGCTTTCACTGGAAATTTCCCCCCAGGTGCTGTAGGCTAGAGTCACGGCTCCCAAGAACAGTGCTTGCCTGGCATGCATGGTTCTGAACCTCCAACTGCAAAAAATGACACATACCTTGACCCTTGGAAGGCTGAGGCAGGGGGATTGCCATGAGTGCAAAGCCAGACTGGGTGGCATAGTTAGACCCTGTCTCAAAAAACCAAAAACAATTAAATAACTAAAGTCAGGCAAGTAATCCTACTCGGGAGACTGAGGCAGAGGGATTGTTACATGTCTGAGGCCAGCCTGGACTACATAGGGTTTCAGGCTAGCCCTGTCTACAGAGTAAGGCCCTATTTCAAAAACACAAACAAAATGGTTCTCCCAGCTGCTAATGCTCACCAGGCAATGAAGCCTGGTGAGCATTAGCAATGAAGGCAATGAAGGAGGGTGCTGGCTACAATCAAGGCTGTGGGGGACTGAGGGCAGGCTGTAACAGGCTTGGGGGCCAGGGCTTATACGTGCCTGGGACTCCCAAAGTATTACTGTTCCATGTTCCCGGCGAAGGGCCAGCTGTCCCCCGCCAGCTAGACTCAGCACTTAGTTTAGGAACCAGTGAGCAAGTCAGCCCTTGGGGCAGCCCATACAAGGCCATGGGGCTGGGCAAGCTGCACGCCTGGGTCCGGGGTGGGCACGGTGCCCGGGCAACGAGCTGAAAGCTCATCTGCTCTCAGGGGCCCCTCCCTGGGGACAGCCCCTCCTGGCTAGTCACACCCTGTAGGCTCCTCTATATAACCCAGGGGCACAGGGGCTGCCCCCGGGTCAC
+</Sequence>
+<Annotations>
+300 600 Glorp Glorptype
+</Annotations>
+<Sequence>
+GGATCCTTCCTCCTTGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACTGCACCTGGCCTATTACCCTTCTCAGGCTCTGGAGTCCATCCTTCTGCTCTGTCTCCCTCAGTTCAATTGTTTTTTGTTTTTTGTTTTTTTTTTAGACACAGTCTCGCTCTGTCACCAAGGCTGGAGTGCAGCAGTGCGATCACAGCTCACCGCAGCCTCACCTCCCAGGCTCAAGTGATCCTCCCATCTCGGCCTCTGAGTAGCTGAGACTATAGGTGTGTCCACATGTCCGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGCGTTGGCCAGGGTGGTCTTGAACTCCTGAGCTCAAGCAATCCTCCTGCCTCAGCCTCCTTGTTTTGATTTTTAGATCCCACAAATAACTTGTGATGTTTGTCTTTCTATACCTGGTTCATTTAACATTTTCTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTGTGAGACTGAGTCTTGCTCTGTCACTCAGGCTGGAGGGCAATGGTGCATCTCAGCTCACTGCAACCTCCACCTCCTAGGTTCAAGCAATTCTTATGCCTCAGCCTCCTGGCTAGCTGGGATTACAGGCGTGTGTCACCATGCCAGGCTAATTTTTGTACTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGGCCTCAAGTGATCCACCCGCCTCCGCCTCTGCCTCCCAAAGTGCTGGGATTACGGGCCTGAGCCACTGTGCCCGGCCCATCTAACATTTTCACTGTCAATCACAATGGGATTAAAACTCCTCCCACAGCCCCTAGGGACCATGGGTCTGCTCCTGTCTCCCCTCCAACCTCATCTTCTTCCTCCCACTCTCTCCTTGGCCCCATCTGCTCCAGTCCCCTGGCCTCCTTCCTGTCTGTCCTCAGATGTGCCCAGCCATTCTCACCTCAGCGCCTTTGCACCTGCTGTTCCCCCCAGAGCCGCACATGGCTGGCTCCCTGTTCTCCTTCAGGTCTCTGCTCAGATGTCATCTTCCCAAAGAGGCCTGCCTCGACCTCCCCTGCTGCTGTGCCGTCCCCTCATCTGTGACCCTCTTGCACTATCACCTCCAGGACGGCGGGGGTTTTGTGTTTTGTTGTAGCCTCAGGAAGTGCCTGATAGATCCCTGTTTCGAGACCAGTTCCATTTGGTTTTCTGGGCCTCAGTTTCCGTAACCGTGAAGGAGACCCTCGGCAATCTGAGCTTGCTGGGAAAGGGCTGGGCCCCATGTAAATATTTCTAAAGCACCCCTCTCCCCTCCCCCCTCAGATCAGGAGTCTGAGGGAGAGGCACAGAGGCTCCCTTTCTCTAAGCCAGTCCTCACCTGCCTAAGAAGATGTGAAGGAGACCCAGGAGACCCTGGGATAGGGAGGAACTCAGAGGGAAGGGACATTCTTTTCTTCGTCGCAATCCTGGGAGCTCCCTGGAGGAGGAGACCCGATCAGCCTGCAATCCTGGCGCGTCCCAGGAGGAGAAAGCGGCTTCCTCTATACTGTACTCTCCTCCACAGAACCCCCCTCTCAGCCCTGGAAGTCCTTGCTCACAGCCGAGGCGCCGAGAGCGCTTGCTCTGCCCAGATCTCGGCGAGTCTGCGCCCGCGCTCTGAACGGCGTCGCTGCCCAGCCCCCTTCCCCGGGAGGTGGGAGCGGCCACCCAGGGCCCCGTGGCTGCCCTTGTAAGGAGGCGAGGCCGAGGACACCCGAGACGCCCGGTTATAATTAACCAGGACACGTGGCGAACCCCCCTCCAACACCTGCCCCCGAACCCCCCCATACCCAGCGCCTCGGGTCTCGGCCTTTGCGGCAGAGGAGACAGCAAAGCGCCCTCTAAAAATAACTCCTTTCCCGGCGACCGAGACCCTCCCTGTCCCCGCACAGCGAAATCTCCCAGTGGCACCGAGGGGGCGAGGGTTAAGTGGGGGGGAGGGTGACCACCGCCTCCCACCCTTGCCCTGAGTTTGAATCTCTCCAACTCAGCCAGCCTCAGTTTCCCCTCCACTCAGTCCCTAGGAGGAAGGGGCGCCCAAGCGGGTTTCTGGGGTTAGACTGCCCTCCATTGCAATTGGTCCTTCTCCCGGCCTCTGCTTCCTCCAGCTCACAGGGTATCTGCTCCTCCTGGAGCCACACCTTGGTTCCCCGAGGTGCCGCTGGGACTCGGGTAGGGGTGAGGGCCCAGGGGCGACAGGGGGAGCCGAGGGCCACAGGAAGGGCTGGTGGCTGAAGGAGACTCAGGGGCCAGGGGACGGTGGCTTCTACGTGCTTGGGACGTTCCCAGCCACCGTCCCATGTTCCCGGCGGGGGCCAGCTGTCCCCACCGCCAGCCCAACTCAGCACTTGGTTAGGGTATCAGCTTGGTGGGGGCGTGAGCCCAGCCCTGGGGCGCTCAGCCCATACAAGGCCATGGGGCTGGGCGCAAAGCATGCCTGGGTTCAGGGTGGGTATGGTGCCGGAGCAGGGAGGTGAGAGGCTCAGCTGCCCTCCAGAACTCCTCCCTGGGGACAACCCCTCCCAGCCAATAGCACAGCCTAGGTCCCCCTATATAAGGCCACGGCTGCTGGCCCTTCCTTTGGGTCAGTGTCACCTCCAGGATACAGACAGCCCCCCTTCAGCCCAGCCCAGCCAGGTACTGCACGGGGCGGGAATCTGGGTGGGGGCCAGAGTAGGGGATTTCTGTGGGTGCTAGAGGCTTGGCTTGGGAAAGGGTCTGTGTGTCACCCCTTGCTCCACCAACATCCTCCTATACAAAGGCAGGTCGGTGCGTGGGAAGGTTGACCCTTGTGTGTCTGGGAGGCCCCTCCATCTGTGAGGCTGCCTGAACCCCCACTGGGACCTGTGATTTCTGCGGCACAG
+</Sequence>
+<Annotations>
+300 600 Glorp Glorptype
+</Annotations>
+<Sequence>
+CTCCCTGAGGGGAGTGCCCCGCTTAGCCCTCAGCCCTGGCACCCACCAGGCAGAGGAGGCAGCTCCCAGAGTCCCCGGCTGAGGGGGCCTGCCCATGTCCTCGCGAGTCGGGCACCCAGTCCCCTTCCCTGGGGGCCTCGGGTGCCTTGTAAGGAGGCAAGGCCCAGGACACCCGAGCTGCCGGCTATAATTAGCCTGGACACGTGGGCCCCCCGCCAGCACCTGCCCTGAGCCCCCCTACCCGCAGCCTTGGGTGCTGGGACTGCCGACAGCAGAGACCGCTCTAAAAATAGCTCCCTTCCTGGACGGCCCCTCCCAGCAGGCCCCCCACCCCCCGCTGAGGCTCACTGCTGGTGTCCCTGCCTGGTGCTCCCTAGGGTGTGCACCCACGGCAGGTGCAGAGGCAGGGGGCACCGCGGGGGGCTGGTAACAGCAGCAGGCCTAGGGGCCAGGGGACGGCGAGCTGTACGTGCCAGGACACCCCCAGCCACTGTCCCGTGCTCCCGGCGGGGGCCAGCTGTCCCCCGCCAGCCCGACTCAGCACTTGCTCTGCACATCGGCCTGGGGCGGCCCATACAAGGGCATGGGGCTGGGCACAAGGCACGCCCGCGTCCAGGTGGGCACTGTGCCCGGGCATGGTGGGGGGAGAGGCTGGGCTGCCTTCCAGGCCCCCTCCCTGGGGCCAGCCCCGCCCAGCCAGTGGCACAGCAGGGTCCCCTACATAAAGCCGGGGCCGCGGGCCCTGGATCTGCCTCAGTGTCGCCTGCAGGACACACGTAGCCCCGCTCAGCACAGCCCAGCCAG
+</Sequence>
+<Annotations>
+300 600 Glorp Glorptype
+</Annotations>
+</Mussa_Sequence>