X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=mussa.git;a=blobdiff_plain;f=qui%2Fsubanalysis%2FSubanalysisWindow.cpp;h=6ed658df7686c53fffea97c7f08c4c5c03cb88be;hp=fec991c75e4bf614b605ae6824743add819a3726;hb=079a158e1d058a5a6b1ceac667edef56d3dcad7f;hpb=a6104dae2b44645826ee3e83c8444ba012b928ac

diff --git a/qui/subanalysis/SubanalysisWindow.cpp b/qui/subanalysis/SubanalysisWindow.cpp
index fec991c..6ed658d 100644
--- a/qui/subanalysis/SubanalysisWindow.cpp
+++ b/qui/subanalysis/SubanalysisWindow.cpp
@@ -12,20 +12,23 @@
 SubanalysisWindow::SubanalysisWindow(MussaRef m, QWidget *parent)
   : QWidget(parent),
     analysis(m),
+    parameterLayout(0),
+    thresholdLabel(0),
+    windowLabel(0),
     window(0),
     threshold(0),
     table(0),
     ok(0),
     cancel(0)
 {
-  QGridLayout *parameterLayout = new QGridLayout;
+  parameterLayout = new QGridLayout;
 
-  QLabel *thresholdLabel = new QLabel(tr("threshold (bp)"));
+  thresholdLabel = new QLabel(tr("threshold (bp)"));
   parameterLayout->addWidget(thresholdLabel, 0, 0);
   threshold = new QSpinBox(this);
   threshold->setValue(8);
   parameterLayout->addWidget(threshold, 1, 0);
-  QLabel *windowLabel = new QLabel(tr("window (bp)"));
+  windowLabel = new QLabel(tr("window (bp)"));
   parameterLayout->addWidget(windowLabel, 0, 1);
   window = new QSpinBox(this);
   window->setValue(10);
@@ -119,6 +122,7 @@ void SubanalysisWindow::run()
     new_m->set_motifs(motifs_copy, color_copy);
     MussaWindow *mw = new MussaWindow(new_m);
     mw->show();
+	mw->setSoftThreshold(threshold->value());
     model.clear();
     hide();
   } catch(mussa_error e) {