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(parent: 72532c0) | patch
start the trivial sequence filter
authorDiane Trout <diane@caltech.edu>
Thu, 13 Jul 2006 01:28:34 +0000 (01:28 +0000)
committerDiane Trout <diane@caltech.edu>
Thu, 13 Jul 2006 01:28:34 +0000 (01:28 +0000)
commit7f1791e0ff395113cbf1f1b6e837102b14c16316
treef86f95c60269bc889ee8457bdd390a82eeadff96tree | snapshot
parent72532c040bd82030012f1ed9e8f777ba9c2a8cbfcommit | diff
start the trivial sequence filter
repeatmasker is annoying because it is slow as a webservice and
depends on a bunch of hard to access components when run locally.

So the idea was how much of an improvment to mussa would there be if
we caught just the absolute simplest repeats?
alg/CMakeLists.txt diff | blob | history
alg/tsf/CMakeLists.txt [new file with mode: 0644] blob
alg/tsf/test_tsf.cpp [new file with mode: 0644] blob
alg/tsf/trivial_filter.cpp [new file with mode: 0644] blob
alg/tsf/trivial_filter.hpp [new file with mode: 0644] blob
MUSSA multi-species alignment tool