X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=pysam.git;a=blobdiff_plain;f=samtools%2Fbedidx.c.pysam.c;h=2bbb05f5347849eaf7f2689fb78152cae732c241;hp=c3ab06ff5a82be4e4c377bdb9c343f30754418c4;hb=ca46ef4ba4a883c57cea62d5bf1bc021f1185109;hpb=d02fe5283ed7a93a2f76a5d6dc6e37b40c11b9b1

diff --git a/samtools/bedidx.c.pysam.c b/samtools/bedidx.c.pysam.c
index c3ab06f..2bbb05f 100644
--- a/samtools/bedidx.c.pysam.c
+++ b/samtools/bedidx.c.pysam.c
@@ -6,6 +6,10 @@
 #include <stdio.h>
 #include <zlib.h>
 
+#ifdef _WIN32
+#define drand48() ((double)rand() / RAND_MAX)
+#endif
+
 #include "ksort.h"
 KSORT_INIT_GENERIC(uint64_t)
 
@@ -121,8 +125,10 @@ void *bed_read(const char *fn)
 			if (ks_getuntil(ks, 0, str, &dret) > 0 && isdigit(str->s[0])) {
 				beg = atoi(str->s); // begin
 				if (dret != '\n') {
-					if (ks_getuntil(ks, 0, str, &dret) > 0 && isdigit(str->s[0]))
+					if (ks_getuntil(ks, 0, str, &dret) > 0 && isdigit(str->s[0])) {
 						end = atoi(str->s); // end
+						if (end < beg) end = -1;
+					}
 				}
 			}
 		}