X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=pysam.git;a=blobdiff_plain;f=tests%2FMakefile;fp=tests%2FMakefile;h=34828290149d9e484c5638230c3d241975dc5eb9;hp=38d30f0ccf480f42f9651579297733c541bbc0a3;hb=d02fe5283ed7a93a2f76a5d6dc6e37b40c11b9b1;hpb=d828f9c9aa78e3d1687265b52de841f3f3852089

diff --git a/tests/Makefile b/tests/Makefile
index 38d30f0..3482829 100644
--- a/tests/Makefile
+++ b/tests/Makefile
@@ -1,11 +1,14 @@
-all: ex1.glf ex1.pileup.gz ex1.bam.bai ex1.glfview.gz \
+all: ex1.pileup.gz ex1.bam.bai \
 	ex2.sam.gz ex2.sam ex1.sam \
 	ex2.bam \
 	ex3.bam ex3.bam.bai \
 	ex4.bam ex4.bam.bai \
 	ex5.bam ex5.bam.bai \
 	ex6.bam \
-	ex8.bam
+	ex8.bam ex8.bam.bai \
+	ex9_nofail.bam.bai \
+	ex9_fail.bam.bai \
+        ex10.bam ex10.bam.bai
 
 ex2.sam.gz: ex1.bam ex1.bam.bai
 		samtools view -h ex1.bam | gzip > ex2.sam.gz
@@ -24,10 +27,8 @@ ex1.bam:ex1.sam.gz ex1.fa.fai
 		samtools index $<
 ex1.pileup.gz:ex1.bam ex1.fa
 		samtools pileup -cf ex1.fa ex1.bam | gzip > ex1.pileup.gz
-ex1.glf:ex1.bam ex1.fa	
-		samtools pileup -gf ex1.fa ex1.bam > ex1.glf
-ex1.glfview.gz:ex1.glf
-		samtools glfview ex1.glf | gzip > ex1.glfview.gz
 
 clean:
-		rm -fr *.bam *.bai *.glf* *.fai *.pileup* *~ calDepth *.dSYM pysam_*.sam ex2.sam ex2.sam.gz ex1.sam
+	rm -fr *.bam *.bai *.fai *.pileup* \
+		*~ calDepth *.dSYM pysam_*.sam \
+	ex2.sam ex2.sam.gz ex1.sam