woldlab.caltech.edu Git - pysam.git/commit

author	Diane Trout <diane@caltech.edu>
	Fri, 19 Nov 2010 19:43:43 +0000 (11:43 -0800)
committer	Diane Trout <diane@caltech.edu>
	Fri, 19 Nov 2010 19:43:43 +0000 (11:43 -0800)
commit	6a7c3f175b210cc16d09a5e8e4c1d47333dbe1c6
tree	004db13755c802fce255a2b1498017fc3ceb0642	tree \| snapshot
parent	aa8ecff068edbb09a03bd874fce716e93e22e53c	commit \| diff

Imported Upstream version 0.3

49 files changed:

MANIFEST.in		diff \| blob \| history
PKG-INFO		diff \| blob \| history
pysam/__init__.py		diff \| blob \| history
pysam/csamtools.pxd		diff \| blob \| history
pysam/csamtools.pyx		diff \| blob \| history
pysam/ctabix.pxd	[new file with mode: 0644]	blob
pysam/ctabix.pyx	[new file with mode: 0644]	blob
pysam/pysam_util.c		diff \| blob \| history
pysam/pysam_util.h		diff \| blob \| history
pysam/version.py	[new file with mode: 0644]	blob
samtools/bam.c		diff \| blob \| history
samtools/bam.h		diff \| blob \| history
samtools/bam_aux.c		diff \| blob \| history
samtools/bam_import.c		diff \| blob \| history
samtools/bam_index.c		diff \| blob \| history
samtools/bam_maqcns.c		diff \| blob \| history
samtools/bam_maqcns.h		diff \| blob \| history
samtools/bam_md.c		diff \| blob \| history
samtools/bam_pileup.c		diff \| blob \| history
samtools/bam_plcmd.c		diff \| blob \| history
samtools/bam_reheader.c	[new file with mode: 0644]	blob
samtools/bam_sort.c		diff \| blob \| history
samtools/bam_tview.c		diff \| blob \| history
samtools/bgzf.c		diff \| blob \| history
samtools/bgzf.h		diff \| blob \| history
samtools/faidx.c		diff \| blob \| history
samtools/knetfile.c		diff \| blob \| history
samtools/kstring.h		diff \| blob \| history
samtools/sam.c		diff \| blob \| history
samtools/sam_header.c		diff \| blob \| history
samtools/sam_view.c		diff \| blob \| history
setup.py		diff \| blob \| history
tabix/bam_endian.h	[new file with mode: 0644]	blob
tabix/bgzf.c	[new file with mode: 0644]	blob
tabix/bgzf.h	[new file with mode: 0644]	blob
tabix/bgzip.c	[new file with mode: 0644]	blob
tabix/index.c	[new file with mode: 0644]	blob
tabix/khash.h	[new file with mode: 0644]	blob
tabix/knetfile.c	[new file with mode: 0644]	blob
tabix/knetfile.h	[new file with mode: 0644]	blob
tabix/ksort.h	[new file with mode: 0644]	blob
tabix/kstring.c	[new file with mode: 0644]	blob
tabix/kstring.h	[new file with mode: 0644]	blob
tabix/tabix.h	[new file with mode: 0644]	blob
tests/ex3.sam		diff \| blob \| history
tests/example.gtf.gz	[new file with mode: 0644]	blob
tests/example.gtf.gz.tbi	[new file with mode: 0644]	blob
tests/pysam_test.py		diff \| blob \| history
tests/tabix_test.py	[new file with mode: 0644]	blob

debian packaging for pysam

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