1 samtools (0.1.17-1) UNRELEASED; urgency=low
3 * New upstream release 0.1.17 (6 July, 2011).
5 -- Charles Plessy <plessy@debian.org> Mon, 11 Jul 2011 20:22:01 +0900
7 samtools (0.1.16-1) unstable; urgency=low
9 * New upstream release, implementing SAM Spec v1.4.
10 * Distribute sam.h and the other headers in /usr/include/samtools.
11 Closes: #625622, #626044, LP: #690997.
13 -- Charles Plessy <plessy@debian.org> Thu, 19 May 2011 13:24:25 +0900
15 samtools (0.1.15-1) unstable; urgency=low
17 * New upstream release.
18 * Incremented Standards-Version to reflect conformance with Policy 3.9.2
19 (debian/control, no changes needed).
20 * debian/watch directly interrogates and downloads froms SourceForge.
22 -- Charles Plessy <plessy@debian.org> Tue, 12 Apr 2011 19:44:41 +0900
24 samtools (0.1.14-1) unstable; urgency=low
26 * New upstream release.
28 -- Charles Plessy <plessy@debian.org> Tue, 29 Mar 2011 13:13:54 +0900
30 samtools (0.1.13-1) unstable; urgency=low
32 * New upstream release:
33 - backward incompatible with VCF/BCF generated by samtools older
34 than r921 inclusive (0.1.12a is r862);
35 - buildable with with ld --as-needed (Closes: #606004);
36 - the helper tool bcf-fix.pl was removed.
37 * Install the manual page of bcftools (debian/rules,
38 debian/samtools.manpages). Closes: #616025.
40 -- Charles Plessy <plessy@debian.org> Wed, 02 Mar 2011 13:54:34 +0900
42 samtools (0.1.12a-1) unstable; urgency=low
44 * New upstream release.
45 * Use bzip2 compression for the binary packages (debian/rules).
46 * Incremented debhelper compatibility level to 8, in case ‘--‘ is not
47 available in earlier versions (debian/compat, debian/control).
49 -- Charles Plessy <plessy@debian.org> Fri, 03 Dec 2010 13:32:21 +0900
51 samtools (0.1.10-1) unstable; urgency=low
53 * New upstream release.
55 -- Charles Plessy <plessy@debian.org> Wed, 17 Nov 2010 20:32:40 +0900
57 samtools (0.1.9-1) unstable; urgency=low
59 * New upstream release, and new program: bcftools.
60 * debian/rules, debian/samtools.install: install bcftools, its manpage,
61 and bcf-fix.pl and vcfutils.pl.
62 * debian/samtools.examples, debian/rules: install and clean new examples.
63 * Incremented Standards-Version to reflect conformance with Policy 3.9.1
64 (debian/control, no changes needed).
65 * Updated and reformatted debian/copyright according to latest DEP-5 draft.
67 -- Charles Plessy <plessy@debian.org> Mon, 01 Nov 2010 20:06:32 +0900
69 samtools (0.1.8-1) unstable; urgency=low
71 * New upstream release.
72 * Updated the VCS fields to the current Git repository (debian/control).
73 * Install python scripts in usr/share/samtools, and suggest python
74 (debian/samtools.install, debian/rules, debian/control).
75 * Incremented Standards-Version to reflect conformance with Policy 3.9.0
76 (debian/control, no changes needed).
77 * Added notes on how the package is tested (debian/README.Debian).
79 -- Charles Plessy <plessy@debian.org> Wed, 14 Jul 2010 14:08:59 +0900
81 samtools (0.1.7a~dfsg-1) unstable; urgency=low
83 * New upstream release: new script sam2vcf.pl, and many other changes.
84 * Package converted to the format ‘3.0 (quilt)’ (debian/source/format).
85 * Wrote a manual page for razip (debian/razip.1).
86 * Better clean the example directory to make the source package
87 buildable twice in a row (debian/rules).
89 -- Charles Plessy <plessy@debian.org> Tue, 17 Nov 2009 21:38:24 +0900
91 samtools (0.1.6~dfsg-1) unstable; urgency=low
93 * New upstream release.
94 * Upstream sources repackaged to remove the win32 directory:
95 - The removal was done with git-import-orig in a parallel Git repository,
96 and the corresponding debian/gbp.conf file was added to this package.
97 - Mangled the ~dfsg string of the Debian version in debian/watch.
98 - Added a debian/README.source file and explanations in debian/copyright.
100 -- Charles Plessy <plessy@debian.org> Mon, 14 Sep 2009 21:58:36 +0900
102 samtools (0.1.5c-2) unstable; urgency=low
104 * Rebuilt with -fPIC (debian/rules, README.Debian).
105 * Small corrections to the description from upstream (debian/changelog).
106 * Incremented Standards-Version to reflect conformance with Policy 3.8.3
109 -- Charles Plessy <plessy@debian.org> Thu, 03 Sep 2009 19:29:40 +0900
111 samtools (0.1.5c-1) unstable; urgency=low
113 * Initial release (Closes: #540453)
115 -- Charles Plessy <plessy@debian.org> Sun, 16 Aug 2009 14:38:20 +0900