1 samtools (0.1.16-1) UNRELEASED; urgency=low
3 * New upstream release, implementing SAM Spec v1.4.
5 -- Charles Plessy <plessy@debian.org> Sat, 07 May 2011 17:57:57 +0900
7 samtools (0.1.15-1) unstable; urgency=low
9 * New upstream release.
10 * Incremented Standards-Version to reflect conformance with Policy 3.9.2
11 (debian/control, no changes needed).
12 * debian/watch directly interrogates and downloads froms SourceForge.
14 -- Charles Plessy <plessy@debian.org> Tue, 12 Apr 2011 19:44:41 +0900
16 samtools (0.1.14-1) unstable; urgency=low
18 * New upstream release.
20 -- Charles Plessy <plessy@debian.org> Tue, 29 Mar 2011 13:13:54 +0900
22 samtools (0.1.13-1) unstable; urgency=low
24 * New upstream release:
25 - backward incompatible with VCF/BCF generated by samtools older
26 than r921 inclusive (0.1.12a is r862);
27 - buildable with with ld --as-needed (Closes: #606004);
28 - the helper tool bcf-fix.pl was removed.
29 * Install the manual page of bcftools (debian/rules,
30 debian/samtools.manpages). Closes: #616025.
32 -- Charles Plessy <plessy@debian.org> Wed, 02 Mar 2011 13:54:34 +0900
34 samtools (0.1.12a-1) unstable; urgency=low
36 * New upstream release.
37 * Use bzip2 compression for the binary packages (debian/rules).
38 * Incremented debhelper compatibility level to 8, in case ‘--‘ is not
39 available in earlier versions (debian/compat, debian/control).
41 -- Charles Plessy <plessy@debian.org> Fri, 03 Dec 2010 13:32:21 +0900
43 samtools (0.1.10-1) unstable; urgency=low
45 * New upstream release.
47 -- Charles Plessy <plessy@debian.org> Wed, 17 Nov 2010 20:32:40 +0900
49 samtools (0.1.9-1) unstable; urgency=low
51 * New upstream release, and new program: bcftools.
52 * debian/rules, debian/samtools.install: install bcftools, its manpage,
53 and bcf-fix.pl and vcfutils.pl.
54 * debian/samtools.examples, debian/rules: install and clean new examples.
55 * Incremented Standards-Version to reflect conformance with Policy 3.9.1
56 (debian/control, no changes needed).
57 * Updated and reformatted debian/copyright according to latest DEP-5 draft.
59 -- Charles Plessy <plessy@debian.org> Mon, 01 Nov 2010 20:06:32 +0900
61 samtools (0.1.8-1) unstable; urgency=low
63 * New upstream release.
64 * Updated the VCS fields to the current Git repository (debian/control).
65 * Install python scripts in usr/share/samtools, and suggest python
66 (debian/samtools.install, debian/rules, debian/control).
67 * Incremented Standards-Version to reflect conformance with Policy 3.9.0
68 (debian/control, no changes needed).
69 * Added notes on how the package is tested (debian/README.Debian).
71 -- Charles Plessy <plessy@debian.org> Wed, 14 Jul 2010 14:08:59 +0900
73 samtools (0.1.7a~dfsg-1) unstable; urgency=low
75 * New upstream release: new script sam2vcf.pl, and many other changes.
76 * Package converted to the format ‘3.0 (quilt)’ (debian/source/format).
77 * Wrote a manual page for razip (debian/razip.1).
78 * Better clean the example directory to make the source package
79 buildable twice in a row (debian/rules).
81 -- Charles Plessy <plessy@debian.org> Tue, 17 Nov 2009 21:38:24 +0900
83 samtools (0.1.6~dfsg-1) unstable; urgency=low
85 * New upstream release.
86 * Upstream sources repackaged to remove the win32 directory:
87 - The removal was done with git-import-orig in a parallel Git repository,
88 and the corresponding debian/gbp.conf file was added to this package.
89 - Mangled the ~dfsg string of the Debian version in debian/watch.
90 - Added a debian/README.source file and explanations in debian/copyright.
92 -- Charles Plessy <plessy@debian.org> Mon, 14 Sep 2009 21:58:36 +0900
94 samtools (0.1.5c-2) unstable; urgency=low
96 * Rebuilt with -fPIC (debian/rules, README.Debian).
97 * Small corrections to the description from upstream (debian/changelog).
98 * Incremented Standards-Version to reflect conformance with Policy 3.8.3
101 -- Charles Plessy <plessy@debian.org> Thu, 03 Sep 2009 19:29:40 +0900
103 samtools (0.1.5c-1) unstable; urgency=low
105 * Initial release (Closes: #540453)
107 -- Charles Plessy <plessy@debian.org> Sun, 16 Aug 2009 14:38:20 +0900