1 samtools (0.1.17-1) UNRELEASED; urgency=low
3 * New upstream release 0.1.17 (6 July, 2011).
4 * bcftools.1 and samtools.1 merged (debian/rules, debian/samtools.manpages).
6 -- Charles Plessy <plessy@debian.org> Mon, 11 Jul 2011 20:22:01 +0900
8 samtools (0.1.16-1) unstable; urgency=low
10 * New upstream release, implementing SAM Spec v1.4.
11 * Distribute sam.h and the other headers in /usr/include/samtools.
12 Closes: #625622, #626044, LP: #690997.
14 -- Charles Plessy <plessy@debian.org> Thu, 19 May 2011 13:24:25 +0900
16 samtools (0.1.15-1) unstable; urgency=low
18 * New upstream release.
19 * Incremented Standards-Version to reflect conformance with Policy 3.9.2
20 (debian/control, no changes needed).
21 * debian/watch directly interrogates and downloads froms SourceForge.
23 -- Charles Plessy <plessy@debian.org> Tue, 12 Apr 2011 19:44:41 +0900
25 samtools (0.1.14-1) unstable; urgency=low
27 * New upstream release.
29 -- Charles Plessy <plessy@debian.org> Tue, 29 Mar 2011 13:13:54 +0900
31 samtools (0.1.13-1) unstable; urgency=low
33 * New upstream release:
34 - backward incompatible with VCF/BCF generated by samtools older
35 than r921 inclusive (0.1.12a is r862);
36 - buildable with with ld --as-needed (Closes: #606004);
37 - the helper tool bcf-fix.pl was removed.
38 * Install the manual page of bcftools (debian/rules,
39 debian/samtools.manpages). Closes: #616025.
41 -- Charles Plessy <plessy@debian.org> Wed, 02 Mar 2011 13:54:34 +0900
43 samtools (0.1.12a-1) unstable; urgency=low
45 * New upstream release.
46 * Use bzip2 compression for the binary packages (debian/rules).
47 * Incremented debhelper compatibility level to 8, in case ‘--‘ is not
48 available in earlier versions (debian/compat, debian/control).
50 -- Charles Plessy <plessy@debian.org> Fri, 03 Dec 2010 13:32:21 +0900
52 samtools (0.1.10-1) unstable; urgency=low
54 * New upstream release.
56 -- Charles Plessy <plessy@debian.org> Wed, 17 Nov 2010 20:32:40 +0900
58 samtools (0.1.9-1) unstable; urgency=low
60 * New upstream release, and new program: bcftools.
61 * debian/rules, debian/samtools.install: install bcftools, its manpage,
62 and bcf-fix.pl and vcfutils.pl.
63 * debian/samtools.examples, debian/rules: install and clean new examples.
64 * Incremented Standards-Version to reflect conformance with Policy 3.9.1
65 (debian/control, no changes needed).
66 * Updated and reformatted debian/copyright according to latest DEP-5 draft.
68 -- Charles Plessy <plessy@debian.org> Mon, 01 Nov 2010 20:06:32 +0900
70 samtools (0.1.8-1) unstable; urgency=low
72 * New upstream release.
73 * Updated the VCS fields to the current Git repository (debian/control).
74 * Install python scripts in usr/share/samtools, and suggest python
75 (debian/samtools.install, debian/rules, debian/control).
76 * Incremented Standards-Version to reflect conformance with Policy 3.9.0
77 (debian/control, no changes needed).
78 * Added notes on how the package is tested (debian/README.Debian).
80 -- Charles Plessy <plessy@debian.org> Wed, 14 Jul 2010 14:08:59 +0900
82 samtools (0.1.7a~dfsg-1) unstable; urgency=low
84 * New upstream release: new script sam2vcf.pl, and many other changes.
85 * Package converted to the format ‘3.0 (quilt)’ (debian/source/format).
86 * Wrote a manual page for razip (debian/razip.1).
87 * Better clean the example directory to make the source package
88 buildable twice in a row (debian/rules).
90 -- Charles Plessy <plessy@debian.org> Tue, 17 Nov 2009 21:38:24 +0900
92 samtools (0.1.6~dfsg-1) unstable; urgency=low
94 * New upstream release.
95 * Upstream sources repackaged to remove the win32 directory:
96 - The removal was done with git-import-orig in a parallel Git repository,
97 and the corresponding debian/gbp.conf file was added to this package.
98 - Mangled the ~dfsg string of the Debian version in debian/watch.
99 - Added a debian/README.source file and explanations in debian/copyright.
101 -- Charles Plessy <plessy@debian.org> Mon, 14 Sep 2009 21:58:36 +0900
103 samtools (0.1.5c-2) unstable; urgency=low
105 * Rebuilt with -fPIC (debian/rules, README.Debian).
106 * Small corrections to the description from upstream (debian/changelog).
107 * Incremented Standards-Version to reflect conformance with Policy 3.8.3
110 -- Charles Plessy <plessy@debian.org> Thu, 03 Sep 2009 19:29:40 +0900
112 samtools (0.1.5c-1) unstable; urgency=low
114 * Initial release (Closes: #540453)
116 -- Charles Plessy <plessy@debian.org> Sun, 16 Aug 2009 14:38:20 +0900