1 Format: http://dep.debian.net/deps/dep5/
2 Source: http://sourceforge.net/projects/samtools/files/samtools/0.1.17/samtools-0.1.17.tar.bz2
5 Copyright: © 2008–2010, Genome Research Ltd. (GRL)
9 Files: kprobaln.h kprobaln.c
10 Copyright: © 2003-2006, 2008-2010, by Heng Li <lh3lh3@live.co.uk>
15 Copyright: © 2010 Broad Institute
19 Files: misc/export2sam.pl bam_cat.c
20 Copyright: © 2010 Illumina, Inc.
25 Copyright: © 2008 Broad Institute / Massachusetts Institute of Technology
30 Copyright: © 2008, 2009, 2011 by Attractive Chaos <attractor@live.co.uk>
34 Files: bcftools/kmin.?
35 Copyright: © 2008, 2010 by Attractive Chaos <attractor@live.co.uk>
40 Copyright: © 2008 by Genome Research Ltd (GRL).
41 2010 by Attractive Chaos <attractor@live.co.uk>
46 Copyright: 2008, Jue Ruan <ruanjue@gmail.com>, Heng Li <lh3@sanger.ac.uk>
47 License: NetBSD-similar
48 Redistribution and use in source and binary forms, with or without
49 modification, are permitted provided that the following conditions
51 1. Redistributions of source code must retain the above copyright
52 notice, this list of conditions and the following disclaimer.
53 2. Redistributions in binary form must reproduce the above copyright
54 notice, this list of conditions and the following disclaimer in the
55 documentation and/or other materials provided with the distribution.
57 THIS SOFTWARE IS PROVIDED BY THE AUTHOR AND CONTRIBUTORS ``AS IS'' AND
58 ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
59 IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
60 ARE DISCLAIMED. IN NO EVENT SHALL THE AUTHOR OR CONTRIBUTORS BE LIABLE
61 FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
62 DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS
63 OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION)
64 HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
65 LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY
66 OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF
68 Name: RAZF : Random Access compressed(Z) File
72 Copyright: no copyright is claimed
73 License: MD5-fourmilab
74 This code implements the MD5 message-digest algorithm.
75 The algorithm is due to Ron Rivest. This code was
76 written by Colin Plumb in 1993, no copyright is claimed.
77 This code is in the public domain; do with it what you wish.
79 Equivalent code is available from RSA Data Security, Inc.
80 This code has been tested against that, and is equivalent,
81 except that you don't need to include two pages of legalese
84 To compute the message digest of a chunk of bytes, declare an
85 MD5Context structure, pass it to MD5Init, call MD5Update as
86 needed on buffers full of bytes, and then call MD5Final, which
87 will fill a supplied 16-byte array with the digest.
90 Files: win32/xcurses.h
91 Copyright: Public Domain
92 License: public-domain
93 This file is part of PDCurses (http://pdcurses.sourceforge.net/),
94 which is in the public domain.
98 Copyright: © 1995-2005 Jean-loup Gailly and Mark Adler
100 This software is provided 'as-is', without any express or implied
101 warranty. In no event will the authors be held liable for any damages
102 arising from the use of this software.
104 Permission is granted to anyone to use this software for any purpose,
105 including commercial applications, and to alter it and redistribute it
106 freely, subject to the following restrictions:
108 1. The origin of this software must not be misrepresented; you must not
109 claim that you wrote the original software. If you use this software
110 in a product, an acknowledgment in the product documentation would be
111 appreciated but is not required.
112 2. Altered source versions must be plainly marked as such, and must not be
113 misrepresented as being the original software.
114 3. This notice may not be removed or altered from any source distribution.
116 Jean-loup Gailly Mark Adler
117 jloup@gzip.org madler@alumni.caltech.edu
121 Permission is hereby granted, free of charge, to any person obtaining a copy
122 of this software and associated documentation files (the "Software"), to deal
123 in the Software without restriction, including without limitation the rights
124 to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
125 copies of the Software, and to permit persons to whom the Software is
126 furnished to do so, subject to the following conditions:
128 The above copyright notice and this permission notice shall be included in
129 all copies or substantial portions of the Software.
131 THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
132 IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
133 FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
134 AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
135 LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
136 OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN