examples/toy.sam

   1 @SQ     SN:ref  LN:45
   2 @SQ     SN:ref2 LN:40
   3 r001    163     ref     7       30      8M4I4M1D3M      =       37      39      TTAGATAAAGAGGATACTG     *       XX:B:S,12561,2,20,112
   4 r002    0       ref     9       30      1S2I6M1P1I1P1I4M2I      *       0       0       AAAAGATAAGGGATAAA       *
   5 r003    0       ref     9       30      5H6M    *       0       0       AGCTAA  *
   6 r004    0       ref     16      30      6M14N1I5M       *       0       0       ATAGCTCTCAGC    *
   7 r003    16      ref     29      30      6H5M    *       0       0       TAGGC   *
   8 r001    83      ref     37      30      9M      =       7       -39     CAGCGCCAT       *
   9 x1      0       ref2    1       30      20M     *       0       0       aggttttataaaacaaataa    ????????????????????
  10 x2      0       ref2    2       30      21M     *       0       0       ggttttataaaacaaataatt   ?????????????????????
  11 x3      0       ref2    6       30      9M4I13M *       0       0       ttataaaacAAATaattaagtctaca      ??????????????????????????
  12 x4      0       ref2    10      30      25M     *       0       0       CaaaTaattaagtctacagagcaac       ?????????????????????????
  13 x5      0       ref2    12      30      24M     *       0       0       aaTaattaagtctacagagcaact        ????????????????????????
  14 x6      0       ref2    14      30      23M     *       0       0       Taattaagtctacagagcaacta ???????????????????????