Uploaded samtools_0.1.16-1_amd64.changes.

[samtools.git] / Makefile

diff --git a/Makefile b/Makefile
index f0259422e289216096a71bf5cf5bad5fc1aab9e6..4fc03d55ac2ac510be80e6f3817f82ce5584b92a 100644 (file)
--- a/Makefile
+++ b/Makefile
@@ -3,12 +3,12 @@ CFLAGS=               -g -Wall -O2 #-m64 #-arch ppc
 DFLAGS=                -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_USE_KNETFILE -D_CURSES_LIB=1
 KNETFILE_O=    knetfile.o
 LOBJS=         bgzf.o kstring.o bam_aux.o bam.o bam_import.o sam.o bam_index.o \
-                       bam_pileup.o bam_lpileup.o bam_md.o glf.o razf.o faidx.o \
+                       bam_pileup.o bam_lpileup.o bam_md.o glf.o razf.o faidx.o bedidx.o \
                        $(KNETFILE_O) bam_sort.o sam_header.o bam_reheader.o kprobaln.o bam_cat.o
 AOBJS=         bam_tview.o bam_maqcns.o bam_plcmd.o sam_view.o \
                        bam_rmdup.o bam_rmdupse.o bam_mate.o bam_stat.o bam_color.o     \
                        bamtk.o kaln.o bam2bcf.o bam2bcf_indel.o errmod.o sample.o \
-                       cut_target.o phase.o
+                       cut_target.o phase.o bam2depth.o
 PROG=          samtools
 INCLUDES=      -I.
 SUBDIRS=       . bcftools misc