Uploading samtools_0.1.17-1_amd64.changes.

[samtools.git] / bam2bcf.c

diff --git a/bam2bcf.c b/bam2bcf.c
index bd5503d7e55cef2479c1a8d12d3dc0855eab06f2..f263fad55a5d1f1438fd50d127fb2362309f100b 100644 (file)
--- a/bam2bcf.c
+++ b/bam2bcf.c
@@ -236,7 +236,7 @@ int bcf_call2bcf(int tid, int pos, bcf_call_t *bc, bcf1_t *b, bcf_callret1_t *bc
        memcpy(b->gi[0].data, bc->PL, b->gi[0].len * bc->n);
        if (bcr) {
                uint16_t *dp = (uint16_t*)b->gi[1].data;
-               uint8_t *sp = is_SP? b->gi[2].data : 0;
+               int32_t *sp = is_SP? b->gi[2].data : 0;
                for (i = 0; i < bc->n; ++i) {
                        bcf_callret1_t *p = bcr + i;
                        dp[i] = p->depth < 0xffff? p->depth : 0xffff;