Uploaded samtools_0.1.16-1_amd64.changes.

[samtools.git] / bam2bcf.h

diff --git a/bam2bcf.h b/bam2bcf.h
index 26b022c08e89e3597bd6e400690d42bd7ecabe38..958567241936a4c54feae501c725ad77a6e3f1be 100644 (file)
--- a/bam2bcf.h
+++ b/bam2bcf.h
@@ -9,7 +9,9 @@
 
 typedef struct __bcf_callaux_t {
        int capQ, min_baseQ;
-       int openQ, extQ, tandemQ;
+       int openQ, extQ, tandemQ; // for indels
+       int min_support; // for collecting indel candidates
+       double min_frac; // for collecting indel candidates
        // for internal uses
        int max_bases;
        int indel_types[4];