Imported Upstream version 0.1.6~dfsg

[samtools.git] / bam_maqcns.h

diff --git a/bam_maqcns.h b/bam_maqcns.h
index 36704d7bce51104e1a8d73ed233f8ebd4b8ce582..2a82aeee8057f5992570d0896a1621b9116057cd 100644 (file)
--- a/bam_maqcns.h
+++ b/bam_maqcns.h
@@ -24,7 +24,8 @@ typedef struct {
 
 typedef struct {
        int indel1, indel2;
-       int cnt1, cnt2, cnt_ambi, cnt_anti;
+       int cnt1, cnt2, cnt_anti;
+       int cnt_ref, cnt_ambi;
        char *s[2];
        //
        int gt, gl[2];