Imported Upstream version 0.1.17

[samtools.git] / bcftools / Makefile

diff --git a/bcftools/Makefile b/bcftools/Makefile
index fd2e2dfc954febe46bdc5081e9c5dd3ef7e09a07..9b6f8633101cab4ccd8697d489c36091cd808892 100644 (file)
--- a/bcftools/Makefile
+++ b/bcftools/Makefile
@@ -1,7 +1,7 @@
 CC=                    gcc
 CFLAGS=                -g -Wall -O2 #-m64 #-arch ppc
 DFLAGS=                -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE
-LOBJS=         bcf.o vcf.o bcfutils.o prob1.o em.o kfunc.o kmin.o index.o fet.o bcf2qcall.o
+LOBJS=         bcf.o vcf.o bcfutils.o prob1.o em.o kfunc.o kmin.o index.o fet.o mut.o bcf2qcall.o
 OMISC=         ..
 AOBJS=         call1.o main.o $(OMISC)/kstring.o $(OMISC)/bgzf.o $(OMISC)/knetfile.o $(OMISC)/bedidx.o
 PROG=          bcftools
@@ -28,7 +28,7 @@ all:$(PROG)
 lib:libbcf.a
 
 libbcf.a:$(LOBJS)
-               $(AR) -cru $@ $(LOBJS)
+               $(AR) -csru $@ $(LOBJS)
 
 bcftools:lib $(AOBJS)
                $(CC) $(CFLAGS) -o $@ $(AOBJS) -L. $(LIBPATH) -lbcf -lm -lz