Imported Upstream version 0.1.16

[samtools.git] / bcftools / Makefile

diff --git a/bcftools/Makefile b/bcftools/Makefile
index b5a1b1bf6fdefcb7431d93c9890e31606cd25505..fd2e2dfc954febe46bdc5081e9c5dd3ef7e09a07 100644 (file)
--- a/bcftools/Makefile
+++ b/bcftools/Makefile
@@ -1,7 +1,7 @@
 CC=                    gcc
 CFLAGS=                -g -Wall -O2 #-m64 #-arch ppc
 DFLAGS=                -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE
 CC=                    gcc
 CFLAGS=                -g -Wall -O2 #-m64 #-arch ppc
 DFLAGS=                -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE

-LOBJS=         bcf.o vcf.o bcfutils.o prob1.o ld.o kfunc.o index.o fet.o bcf2qcall.o
+LOBJS=         bcf.o vcf.o bcfutils.o prob1.o em.o kfunc.o kmin.o index.o fet.o bcf2qcall.o

 OMISC=         ..
 AOBJS=         call1.o main.o $(OMISC)/kstring.o $(OMISC)/bgzf.o $(OMISC)/knetfile.o $(OMISC)/bedidx.o
 PROG=          bcftools
 OMISC=         ..
 AOBJS=         call1.o main.o $(OMISC)/kstring.o $(OMISC)/bgzf.o $(OMISC)/knetfile.o $(OMISC)/bedidx.o
 PROG=          bcftools