projects
/
samtools.git
/ blobdiff
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
shortlog
|
log
|
commit
|
commitdiff
|
tree
raw
|
inline
| side by side
Uploaded samtools_0.1.16-1_amd64.changes.
[samtools.git]
/
bedidx.c
diff --git
a/bedidx.c
b/bedidx.c
index 92978318d4ccfbbabeeddd150458245f669062d8..722877dcc2aa1d414460c328e6e022a22befecfe 100644
(file)
--- a/
bedidx.c
+++ b/
bedidx.c
@@
-4,6
+4,9
@@
#include <stdio.h>
#include <zlib.h>
#include <stdio.h>
#include <zlib.h>
+#include "ksort.h"
+KSORT_INIT_GENERIC(uint64_t)
+
#include "kseq.h"
KSTREAM_INIT(gzFile, gzread, 8192)
#include "kseq.h"
KSTREAM_INIT(gzFile, gzread, 8192)
@@
-53,6
+56,7
@@
void bed_index(void *_h)
if (kh_exist(h, k)) {
bed_reglist_t *p = &kh_val(h, k);
if (p->idx) free(p->idx);
if (kh_exist(h, k)) {
bed_reglist_t *p = &kh_val(h, k);
if (p->idx) free(p->idx);
+ ks_introsort(uint64_t, p->n, p->a);
p->idx = bed_index_core(p->n, p->a, &p->m);
}
}
p->idx = bed_index_core(p->n, p->a, &p->m);
}
}