Patched the example makefile to not use samtools pileup, deprecated.

[samtools.git] / debian / control

diff --git a/debian/control b/debian/control
index 0020fc580ef91623c1afcb0f78e961b35e8e933f..82e03de4c7dc0e086ec35a1fd98b3109263fd01b 100644 (file)
--- a/debian/control
+++ b/debian/control
@@ -1,24 +1,25 @@
 Source: samtools
 Section: science
 Priority: optional
-Maintainer: Debian-Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
+Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 DM-Upload-Allowed: yes
 Uploaders: Charles Plessy <plessy@debian.org>
-Build-Depends: debhelper (>= 7), cdbs, libncurses5-dev, zlib1g-dev
-Standards-Version: 3.8.2
+Build-Depends: debhelper (>= 8), cdbs, quilt, libncurses5-dev, zlib1g-dev
+Standards-Version: 3.9.2
 Homepage: http://samtools.sourceforge.net
-Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/samtools/trunk/?rev=0&sc=0
-Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/samtools/trunk/
+Vcs-Browser: http://git.debian.org/?p=debian-med/samtools.git
+Vcs-Git: git://git.debian.org/debian-med/samtools.git
 
 Package: samtools
 Architecture: any
 Depends: ${shlibs:Depends}, ${misc:Depends}
+Suggests: python
 Description: processing sequence alignments in SAM and BAM formats
  Samtools is a set of utilities that manipulate nucleotide sequence alignments
- in the BAM format. It imports from and exports to the SAM (Sequence
- Alignment/Map) format, does sorting, merging and indexing, and allows to
- retrieve reads in any regions swiftly. It is designed to work on a stream, and
- is able to open a BAM (not SAM) file on a remote FTP server.
+ in the binary BAM format. It imports from and exports to the ascii SAM
+ (Sequence Alignment/Map) format, does sorting, merging and indexing, and allows
+ to retrieve reads in any regions swiftly. It is designed to work on a stream,
+ and is able to open a BAM (not SAM) file on a remote FTP or HTTP server.
 
 Package: libbam-dev
 Architecture: any
@@ -27,6 +28,6 @@ Depends: ${shlibs:Depends}, ${misc:Depends}
 Description: manipulates nucleotide sequence alignments in BAM or SAM format 
  The BAM library provides I/O and various operations on manipulating nucleotide
  sequence alignments in the BAM (Binary Alignment/Mapping) or SAM (Sequence
- Alignment/Map) format. It now supports importing from or exporting to TAM,
+ Alignment/Map) format. It now supports importing from or exporting to SAM,
  sorting, merging, generating pileup, and quickly retrieval of reads overlapped
  with a specified region.