New upstream release, with among many changes a new python script.
[samtools.git] / debian / rules
index ee5c351837f5e41fbfb82fd3c62be5d5d0d7fb61..f5aaa941ac480eca83e1755e4d647648bbbbbedd 100755 (executable)
@@ -7,3 +7,9 @@ CFLAGS += -fPIC
 
 DEB_MAKE_BUILD_TARGET = all all-recur razip lib
 DEB_MAKE_CHECK_TARGET = -C examples all
+
+clean::
+       $(RM) examples/calDepth examples/ex1.bam examples/ex1.bam.bai examples/ex1.fa.fai examples/ex1.glf examples/ex1.glfview.gz examples/ex1.pileup.gz examples/ex1a.bam examples/ex1b.bam examples/ex1f-rmduppe.bam examples/ex1f-rmdupse.bam examples/ex1f.bam examples/ex1f.rg
+
+binary-fixup/samtools::
+       sed -i 's|^#!/software/bin/python|#!/usr/bin/python|' $(CURDIR)/debian/samtools/usr/share/samtools/varfilter.py