Imported Upstream version 0.1.9

[samtools.git] / misc / samtools.pl

diff --git a/misc/samtools.pl b/misc/samtools.pl
index 9f48b8f7586899a9b9456b3fdc09fb8a28faa3d3..ce8449de622884847003ba538a2cf60c57118c99 100755 (executable)
--- a/misc/samtools.pl
+++ b/misc/samtools.pl
@@ -104,7 +104,6 @@ Options: -Q INT    minimum RMS mapping quality for SNPs [$opts{Q}]
     my $len=0;
        if ($flt == 0) {
          if ($t[2] eq '*') { # an indel
     my $len=0;
        if ($flt == 0) {
          if ($t[2] eq '*') { # an indel

-        

         # If deletion, remember the length of the deletion
         my ($a,$b) = split(m{/},$t[3]);
         my $alen = length($a) - 1;
         # If deletion, remember the length of the deletion
         my ($a,$b) = split(m{/},$t[3]);
         my $alen = length($a) - 1;