X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=samtools.git;a=blobdiff_plain;f=Makefile.mingw;h=f1ae1be081ee976f9a883defdb64cee1724bb9fc;hp=80e8009d17baf955252b27935323f53d0a6c2d55;hb=8af6e7eac6605aab3bd8b1a1f874309b59789b08;hpb=4a17fa7e1f91b2fe04ad334a63fc2b0d5e859d8a diff --git a/Makefile.mingw b/Makefile.mingw index 80e8009..f1ae1be 100644 --- a/Makefile.mingw +++ b/Makefile.mingw @@ -1,13 +1,13 @@ CC= gcc.exe AR= ar.exe CFLAGS= -g -Wall -O2 -DFLAGS= -D_FILE_OFFSET_BITS=64 -D_CURSES_LIB=2 -D_USE_KNETFILE +DFLAGS= -D_CURSES_LIB=2 -D_USE_KNETFILE LOBJS= bgzf.o kstring.o bam_aux.o bam.o bam_import.o sam.o bam_index.o \ bam_pileup.o bam_lpileup.o bam_md.o glf.o razf.o faidx.o bam_sort.o \ knetfile.o AOBJS= bam_tview.o bam_maqcns.o bam_plcmd.o sam_view.o \ bam_rmdup.o bam_rmdupse.o bam_mate.o bam_stat.o bam_color.o \ - bamtk.o + bamtk.o kaln.o sam_header.o PROG= samtools INCLUDES= -Iwin32 SUBDIRS= . @@ -28,8 +28,8 @@ libbam.a:$(LOBJS) samtools:lib $(AOBJS) $(CC) $(CFLAGS) -o $@ $(AOBJS) $(LIBPATH) -lm -L. -lbam -Lwin32 -lz -lcurses -lws2_32 -razip:razip.o razf.o - $(CC) $(CFLAGS) -o $@ razf.o razip.o -lz +razip:razip.o razf.o knetfile.o + $(CC) $(CFLAGS) -o $@ razf.o razip.o knetfile.o -lz bgzip:bgzip.o bgzf.o $(CC) $(CFLAGS) -o $@ bgzf.o bgzip.o -lz