X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=samtools.git;a=blobdiff_plain;f=Makefile;h=13d4a7698e1ded63520b3c8c7a117a45d91af1a1;hp=77cda865c4b38df76fdafe338feae873dabde0e6;hb=e3b3a0177339fb8c099346986e965e3bd5b85999;hpb=8d2494d1fb7cd0fa7c63be5ffba8dd1a11457522

diff --git a/Makefile b/Makefile
index 77cda86..13d4a76 100644
--- a/Makefile
+++ b/Makefile
@@ -4,10 +4,10 @@ DFLAGS=		-D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -D_CURSES_LIB=1
 KNETFILE_O=	knetfile.o
 LOBJS=		bgzf.o kstring.o bam_aux.o bam.o bam_import.o sam.o bam_index.o	\
 			bam_pileup.o bam_lpileup.o bam_md.o glf.o razf.o faidx.o \
-			$(KNETFILE_O) bam_sort.o sam_header.o bam_reheader.o
+			$(KNETFILE_O) bam_sort.o sam_header.o bam_reheader.o kprobaln.o
 AOBJS=		bam_tview.o bam_maqcns.o bam_plcmd.o sam_view.o	\
 			bam_rmdup.o bam_rmdupse.o bam_mate.o bam_stat.o bam_color.o	\
-			bamtk.o kaln.o bam2bcf.o errmod.o sample.o
+			bamtk.o kaln.o bam2bcf.o bam2bcf_indel.o errmod.o sample.o
 PROG=		samtools
 INCLUDES=	-I.
 SUBDIRS=	. bcftools misc
@@ -64,6 +64,7 @@ glf.o:glf.h
 sam_header.o:sam_header.h khash.h
 bcf.o:bcftools/bcf.h
 bam2bcf.o:bam2bcf.h errmod.h bcftools/bcf.h
+bam2bcf_indel.o:bam2bcf.h
 errmod.o:errmod.h
 
 faidx.o:faidx.h razf.h khash.h