X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=samtools.git;a=blobdiff_plain;f=NEWS;h=41a6cc8ebe05185ea8e97f0639fede7ce15675d9;hp=1aa23593df188b1827f6e46bf1779874552fd100;hb=0f906dafb2ad22371a753557562ef95c3034480d;hpb=b301e959d73eee0955c57004f344f17af00703f4 diff --git a/NEWS b/NEWS index 1aa2359..41a6cc8 100644 --- a/NEWS +++ b/NEWS @@ -1,3 +1,30 @@ +Beta Release 0.1.18 (2 September, 2011) +~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + +Notable changes in samtools: + + * Support the new =/X CIGAR operators (by Peter Cock). + + * Allow to subsample BAM while keeping the pairing intact (view -s). + + * Implemented variant distance bias as a new filter (by Petr Danecek). + + * Bugfix: huge memory usage during indexing + + * Bugfix: use of uninitialized variable in mpileup (rare) + + * Bugfix: wrong BAQ probability (rare) + +Notable changes in bcftools: + + * Support indel in the contrast caller. + + * Bugfix: LRT2=nan in rare cases + +(0.1.18: 2 September 2011, r982:295) + + + Beta Release 0.1.17 (6 July, 2011) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~